Below is a list of kinemages and PDB files, one of each for each amino acid type, which show sidechain rotamer conformations. Click on the downward-pointing arrow in the column to download the PDB (with hydrogens added by Reduce) or a kinemage containing the rotamers for that amino acid. If desired, you can also download a compressed tar file containing all 20 kinemages or PDBs from the links given at the bottom of the table. Clicking on the rightmost column arrow will cause a new browser window to open and display the kinemage using MageJava (your browser must be java-capable). Most of the kins allow you to animate through each rotamer. The PDB files were used for making O and XtalView rotamer files, and may conceivably have other uses. Each structure is in idealized Engh and Huber geometry.

Rotamer for amino acid:	Download:		View in JavaMage
	coordinate file	kinemage file
ALA   alanine (only one structure)
ARG   arginine rotamers
ASN   asparagine rotamers
ASP   aspartic acid rotamers
CYS   cysteine rotamers
GLN   glutamine rotamers
GLU   glutamic acid rotamers
HIS   histidine rotamers
ILE   isoleucine rotamers
LEU   leucine rotamers
LYS   lysine rotamers
MET   methionine rotamers
PHE   phenylanine rotamers
PRO   proline rotamers
SER   serine rotamers
THR   threonine rotamers
TRP   tryptophan rotamers
TYR   tyrosine rotamers
VAL   valine rotamers

These compressed files contain either all 19 rotamer PDBs or kinemages listed in the table above.

PDB files:	Kinemages:
rotpdbs.tgz (32KB)	rotkins.tgz (28KB)