@text 
Kinemage Supplement to Branden & Tooze "Introduction to Protein Structure", Second Edition
Chapter 4 -  ALPHA/BETA STRUCTURES
 
		Contents of file C4Al_Bet.kin:
*{Kin 1}* Animation of the open, twisted alpha/beta fold (Fig. 4.1b,4.2b)
*{Kin 2}* 4-sidechain layers in the a/b barrel of glycolate oxidase (Fig. 4.3)
*{Kin 3}* Pyruvate kinase, an enzyme with 3 quite different domains (Fig. 4.5)
*{Kin 4}* Bifunctional a/b-barrel enzyme PRA-isomerase,IGP-synthase (Fig. 4.7)
*{Kin 5}* Active site animation for the a/b barrel enzyme RuBisCo (Fig. 4.8)
*{Kin 6}* The a/b "horseshoe" fold of ribonuclease inhibitor (Fig. 4.10-4.12)
*{Kin 7}* Open, twisted a/b folds: flavodoxin vs adenyl kinase (Fig. 4.14a,b)
*{Kin 8}* Carboxypeptidase - open a/b fold and active site (Fig. 4.19,4.20)
 
   *{Kinemage 1}* animates the folding pattern of an open, twisted, alpha/beta structure.  This is lactate dehydrogenase domain 1, the classic example of this fold.  To match Fig. 4.2b, the first pair of beta-alpha-beta units are in pink and the final pair in skyblue, with the connecting helix in seagreen.  Step through the animation sequence to see the polypeptide build up from N- to C-terminus.  It starts at the bottom center of the sheet and first winds toward you, one strand at a time, placing helices on the left side; then it switches back to the middle again through the green helix and winds toward the back edge, placing helices on the right side of the sheet.  Each turn of the winding forms a righthanded crossover connection.  Choose View2 for a side view of the sheet, and animate again.
 
   *{Kinemage 2}* illustrates the layered packing of side chains inside a typical 8-stranded alpha/beta barrel, this one from the enzyme glycolate oxidase.  The starting view shows the 8-stranded parallel beta barrel (greentint) with its main-chain H-bonds.  Animate once to turn on the 3 core side-chain layers.  Each layer contains 4 side chains from alternate beta strands: the central layer (red) comes from strands 2, 4, 6, and 8, while the top and bottom layers (skyblue) come from strands 1, 3, 5, and 7.  This arrangement emphasizes that such "TIM" barrels actually have only 4-fold, not 8-fold, approximate symmetry, because although the beta-sheet twist produces a shear offset of one residue per strand, the side chains alternate direction and can be in similar positions only after an offset of two.  Animate again to turn on space-filling "CPK" spheres for the central layer (C atoms in pinktint), and once again to see CPKs for all 3 layers.  The side chains packed in the interior of alpha/beta barrels are predominantly large hydrophobics, but for the top and bottom layers they can be long polars (such as the Lys or Gln seen here) that can reach out to solvent.  Also, Gly is surprisingly common in these barrel-interior positions (see Table 4.1), where they can help relieve the strains of curling so tightly around to form the closed beta barrel.  Animate once more for a top view of the barrel, and lastly to see the overall structure, with the ring of helices surrounding the barrel, plus several long loops on the outside.
 
   *{Kinemage 3}* illustrates the 3-domain structure of the enzyme pyruvate kinase.  The largest domain (in pink) is an 8-fold alpha/beta barrel, with its N-terminus labeled in yellow.  One of its loops is long enough to make an entire separate domain (in skyblue), which is an antiparallel beta barrel.  The last, C-terminal domain (in seagreen) is an open, twisted, alpha/beta structure.  View1 matches Fig. 4.5, while View2-4 are close-ups of each domain in turn.
 
   *{Kinemage 4}* is an animated tour of the bifunctional enzyme indole glycerol phosphate synthase - phosphoribosyl anthranilate isomerase (IGPS-PRAI), which is made up of two separate domains each an 8-fold alpha/beta barrel structure.  To match Fig. 4.7, the central cylinder of parallel beta sheet is in pink for each domain, the outer ring of helices in seagreen, and the loops and the N-terminus in white.  Animate to continue the tour, first with the whole molecule, then each of the domains with beta strands numbered.  A phosphate that binds at the active site in each domain is shown as yellow ball&stick; in each case it is in an equivalent position between beta strands 7 and 8, at their C-terminal ends.  However, the local loop structures are different, and the two active sites are far apart and act independently.
 
   *{Kinemage 5}* shows the positioning of the RuBisCo active site at one end of the alpha/beta8 barrel of its central catalytic domain.  Charged active-site side chains are in skyblue (including a modified lysine) and the magnesium ion is in yellow.  Compare the side view in View1 with Fig. 4.8a and the end view of View2 with Fig. 4.8b.  Animate to see the conformational change between the apo and liganded structures, with formation of numerous H-bonds to the substrate analog (2-carboxyarabinitol bisphosphate).  The loop containing Lys 334 (top left in View1) is disordered in the apo-enzyme, but in the complex it swings into place to help bind the ligand with both charged and hydrophobic interactions.  View3 is a closeup of the active site arrangement.  View4 shows how one of the phosphates is bound at the N-terminal end of an alpha helix, making H-bonds to two of the exposed backbone NHs and also interacting electrostatically with the helix dipole.  This is a common mode of phosphate binding, which we will see again in protein/nucleic acid complexes.
 
   *{Kinemage 6}* is an animated tour of the alpha/beta horseshoe fold of ribonuclease inhibitor, which has 16 consecutive, overlapping beta-alpha-beta motifs in an unusually regular 3/4 circle.  Animate to continue the tour of the inhibitor fold, its binding to the ribonuclease enzyme (in greentint, with an orange sulfate at its active site), and then close-ups of conserved side chains in the leucine-rich repeat units.  Two variants of the repeat alternate on successive beta-alpha segments, repeat A of 28 residues and repeat B of 29 residues (see Fig. 4.10).  Seven leucines (shown in gold) form most of the hydrophobic core in each repeat;  the final frame shows those 7 core leucines with space-filling spheres, to match Fig. 4.12.
 
  *{Kinemage 7}* shows a side-by-side comparison of two open, twisted, alpha/beta structures - flavodoxin (pink sheet, on left) vs adenylate kinase (red sheet, on right).  The helices that define the central parts of the alpha/beta fold are seagreen, while the extra loops and helices of adenyl kinase are in white.  Rotating with the mouse will move both structures the same way.  View2 looks perpendicular to the parallel beta sheets.  To see the proteins singly or to animate between them, turn off "Compare" on the Display pulldown menu.
 
  *{Kinemage 8}* shows both an overview and an active-site detail for the proteolytic enzyme carboxypeptidase A.  View1 shows the Calpha backbone of the open, twisted alpha/beta fold, colored to match Fig. 4.19 and to show the more complex organization of its mixed beta sheet:  parts 1, 2, 3, and 4 successively from the N to C terminus are colored pink, seagreen, skyblue, and brown.  View2 is a close-up of the active site, nested in the cleft between the ends of beta strands 3 (pink) and 5 (skyblue), at which point the fold changes direction.  The Zn is in yellow, and there are color-coded balls on the ligand N (blue) and O (red) atoms of His 69, His 196, and Glu 72.  Side chains are also shown for the nearby Glu 270 and Arg 127.
 

    Copyright 1999 Jane S. and David C. Richardson.  Permission freely granted for educational, research, and personal use.  For program updates and more information, see http://kinemage.biochem.duke.edu.
@kinemage 1 
@caption (B&T Fig. 4.1b, 4.2b)
LDH domain 1 - animated construction of the fold of an open, twisted, alpha/beta structure.  Click on the "ANIMATE" button (or press the 'a' key) to see the structure build up from N-terminus to C-terminus.  The first two beta-alpha-beta units are in pink with helices on the left side, and the last two are in skyblue with helices on the right side, while the helix connecting the two halves of the structure is in seagreen.  View1 is from an edge of the beta sheet and View2 from one face of it.  (from PDB file 1LDM)
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{ile 39} 1.535 9.4 7.66
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{lys 59} -9.864 23.6 12.286
{gly 60} -10.086 23.94 8.425
{glu 61} -7.087 21.647 7.904
{met 62} -8.644 19.254 10.416
{met 63} -11.98 19.443 8.555
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{gln 66} -11.82 14.54 8.01
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{ser 69} -11.944 9.726 5.97
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{val 114} 13.98 28.8 20.574
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{ile 116} 8.53 29.03 20.414
{phe 117} 10.146 25.92 21.67
{lys 118} 10.347 27.33 25.217
{phe 119} 6.476 27.387 25.153
{ile 120} 5.724 24.06 23.35
{ile 121} 8.11 21.55 25.
{pro 122} 6.803 21.714 28.59
{asn 123} 3.18 21.025 27.447
{ile 124} 4.23 18.2 25.1
{val 125} 6.02 16.306 27.887
{lys 126} 3.257 17.447 30.174
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{leu 150} 14.3 21.956 28.114
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{gly 152} 15.01 16.29 30.216
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@kinemage 2 
@caption (B&T Fig. 4.3)
Three side-chain layers of 4 residues each, in the core of the alpha/beta8 barrel of the enzyme glycolate oxidase.  Animate for a tour of the barrel (greentint) with H-bonds (brown), the 3 side-chain layers as stick figures (in blue, red, and blue), the center layer as space-filling (CPK) spheres, all 3 layers in CPK, a side view of the barrel, and an overview of the whole structure.  (from PDB file 1GOX)
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{c met 74} P 59.915 44.144 24.171 {n ile 75} 58.819 43.75 23.504
{ca ile 75} 58.304 44.585 22.459
{c ile 75} 57.031 45.318 22.93
{o ile 75} 56.158 44.611 23.404
{c ile 75} P 57.031 45.318 22.93 {n ala 76} 56.992 46.611 22.769
{ca ala 76} 55.897 47.5 23.092
{c ala 76} 54.819 47.389 22.016
{o ala 76} 55.03 47.072 20.832
{c ala 76} P 54.819 47.389 22.016 {n pro 77} 53.589 47.644 22.448
{ca pro 77} 52.441 47.609 21.494
{c pro 77} 52.453 48.868 20.623
{o pro 77} 52.548 49.989 21.184
{c pro 77} P 52.453 48.868 20.623 {n thr 78} 52.419 48.725 19.317
{ca thr 78} 52.383 49.905 18.437
{ca thr 101} P 61.083 37.488 24.744 {c thr 101} 59.558 37.669 24.573
{o thr 101} 58.865 36.894 23.887
{c thr 101} P 59.558 37.669 24.573 {n ile 102} 59.016 38.688 25.208
{ca ile 102} 57.577 38.979 25.193
{c ile 102} 57.143 40.065 24.217
{o ile 102} 57.784 41.121 23.98
{c ile 102} P 57.143 40.065 24.217 {n met 103} 56.002 39.781 23.662
{ca met 103} 55.396 40.731 22.733
{c met 103} 54.132 41.287 23.41
{o met 103} 53.413 40.521 24.059
{c met 103} P 54.132 41.287 23.41 {n thr 104} 53.876 42.558 23.198
{ca thr 104} 52.685 43.246 23.697
{c thr 104} 51.881 43.6 22.447
{o thr 104} 52.358 44.449 21.665
{c thr 104} P 51.881 43.6 22.447 {n leu 105} 50.74 42.925 22.325
{ca leu 105} 49.916 43.2 21.123
{c leu 105} 48.966 44.368 21.418
{o leu 105} 48.391 44.491 22.519
{c leu 105} P 48.966 44.368 21.418 {n ser 106} 48.826 45.164 20.385
{ca ser 106} 47.974 46.353 20.426
{ca ile 123} P 54.597 34.731 26.203 {c ile 123} 54.192 36.036 25.544
{o ile 123} 55.02 36.658 24.859
{c ile 123} P 54.192 36.036 25.544 {n arg 124} 52.931 36.418 25.702
{ca arg 124} 52.407 37.636 25.062
{c arg 124} 51.507 38.395 26.011
{o arg 124} 50.767 37.823 26.848
{c arg 124} P 51.507 38.395 26.011 {n phe 125} 51.585 39.698 25.935
{ca phe 125} 50.803 40.637 26.738
{c phe 125} 49.846 41.331 25.74
{o phe 125} 50.108 41.354 24.512
{c phe 125} P 49.846 41.331 25.74 {n phe 126} 48.735 41.851 26.281
{ca phe 126} 47.753 42.513 25.378
{c phe 126} 47.503 43.904 25.921
{o phe 126} 47.234 44.116 27.114
{c phe 126} P 47.503 43.904 25.921 {n gln 127} 47.603 44.849 25.051
{ca gln 127} 47.417 46.269 25.439
{c gln 127} 45.944 46.55 25.182
{o gln 127} 45.395 46.064 24.198
{c gln 127} P 45.944 46.55 25.182 {n leu 128} 45.401 47.365 26.035
{ca leu 128} 43.969 47.751 25.964
{c leu 128} 43.774 49.118 26.584
{o leu 128} 44.596 49.678 27.285
{c leu 128} P 43.774 49.118 26.584 {n tyr 129} 42.616 49.621 26.321
{ca tyr 129} 41.996 50.856 26.788
{n lys 150} P 49.082 36.442 28.73 {ca lys 150} 49.411 36.409 30.133
{c lys 150} 49.2 37.649 30.965
{o lys 150} 49.278 37.533 32.218
{c lys 150} P 49.2 37.649 30.965 {n ala 151} 48.986 38.778 30.355
{ca ala 151} 48.788 39.986 31.201
{c ala 151} 48.114 41.012 30.314
{o ala 151} 48.06 40.807 29.063
{c ala 151} P 48.114 41.012 30.314 {n ile 152} 47.627 42.049 30.956
{ca ile 152} 46.955 43.129 30.23
{c ile 152} 47.829 44.372 30.453
{o ile 152} 48.173 44.67 31.606
{c ile 152} P 47.829 44.372 30.453 {n ala 153} 48.141 45.091 29.392
{ca ala 153} 48.892 46.339 29.562
{c ala 153} 47.803 47.437 29.327
{o ala 153} 47.48 47.652 28.16
{c ala 153} P 47.803 47.437 29.327 {n leu 154} 47.343 48.046 30.378
{ca leu 154} 46.338 49.102 30.312
{c leu 154} 46.917 50.503 30.121
{o leu 154} 47.567 51.082 31.014
{c leu 154} P 46.917 50.503 30.121 {n thr 155} 46.662 51.093 28.986
{ca thr 155} 47.139 52.458 28.697
{c thr 155} 46.416 53.421 29.61
{o thr 155} 45.151 53.427 29.54
{c thr 155} P 46.416 53.421 29.61 {n val 156} 47.097 54.219 30.426
{ca val 156} 46.296 55.14 31.289
{ca pro 226} P 47.857 40.869 36.056 {c pro 226} 47.677 42.069 35.125
{o pro 226} 47.672 41.93 33.895
{c pro 226} P 47.677 42.069 35.125 {n ile 227} 47.528 43.217 35.768
{ca ile 227} 47.331 44.51 35.119
{c ile 227} 48.563 45.409 35.296
{o ile 227} 48.988 45.675 36.445
{c ile 227} P 48.563 45.409 35.296 {n leu 228} 49.1 45.874 34.186
{ca leu 228} 50.259 46.79 34.198
{c leu 228} 49.735 48.131 33.679
{o leu 228} 49.308 48.257 32.528
{c leu 228} P 49.735 48.131 33.679 {n val 229} 49.734 49.126 34.546
{ca val 229} 49.261 50.491 34.186
{c val 229} 50.381 51.073 33.327
{o val 229} 51.538 51.136 33.806
{c val 229} P 50.381 51.073 33.327 {n lys 230} 50.081 51.434 32.106
{ca lys 230} 51.059 51.982 31.178
{c lys 230} 50.881 53.472 30.949
{o lys 230} 49.825 53.827 30.416
{c lys 230} P 50.881 53.472 30.949 {n gly 231} 51.885 54.267 31.278
{ca gly 231} 51.842 55.721 31.1
{n ala 247} P 49.91 45.199 38.68 {ca ala 247} 50.981 44.194 38.837
{c ala 247} 52.361 44.779 38.493
{o ala 247} 53.416 44.131 38.674
{c ala 247} P 52.361 44.779 38.493 {n gly 248} 52.417 46.002 37.975
{ca gly 248} 53.734 46.598 37.608
{c gly 248} 53.338 47.906 36.91
{o gly 248} 52.156 47.997 36.574
{c gly 248} P 53.338 47.906 36.91 {n ile 249} 54.336 48.779 36.793
{ca ile 249} 54.075 50.071 36.144
{c ile 249} 54.956 50.248 34.94
{o ile 249} 56.156 49.865 35.028
{c ile 249} P 54.956 50.248 34.94 {n ile 250} 54.481 50.821 33.872
{ca ile 250} 55.332 51.035 32.729
{c ile 250} 55.511 52.565 32.674
{o ile 250} 54.526 53.214 32.387
{c ile 250} P 55.511 52.565 32.674 {n val 251} 56.767 52.974 32.965
{ca val 251} 57.058 54.412 32.884
{c val 251} 57.117 54.643 31.352
{o val 251} 58.08 54.222 30.693
{c val 251} P 57.117 54.643 31.352 {n ser 252} 56.107 55.347 30.893
{ca ser 252} 56.028 55.652 29.448
{c ser 252} 55.39 57.018 29.289
{o ser 252} 54.666 57.587 30.12
{c ser 252} P 55.39 57.018 29.289 {n asn 253} 55.642 57.587 28.148
{ca asn 253} 55.084 58.89 27.698
{ca pro 281} P 58.191 45.754 38.897 {c pro 281} 57.819 47.006 38.118
{o pro 281} 56.625 47.216 37.758
{c pro 281} P 57.819 47.006 38.118 {n val 282} 58.881 47.803 37.877
{ca val 282} 58.777 49.054 37.102
{c val 282} 59.551 48.864 35.795
{o val 282} 60.724 48.448 35.816
{c val 282} P 59.551 48.864 35.795 {n phe 283} 58.909 49.143 34.687
{ca phe 283} 59.51 48.978 33.353
{c phe 283} 59.56 50.343 32.697
{o phe 283} 59.003 51.286 33.25
{c phe 283} P 59.56 50.343 32.697 {n leu 284} 60.186 50.375 31.528
{ca leu 284} 60.328 51.626 30.798
{c leu 284} 60.318 51.376 29.313
{o leu 284} 60.689 50.291 28.839
{c leu 284} P 60.318 51.376 29.313 {n asp 285} 59.913 52.429 28.631
{ca asp 285} 59.93 52.456 27.151
{c asp 285} 60.069 53.925 26.761
{o asp 285} 59.795 54.822 27.569
{c asp 285} P 60.069 53.925 26.761 {n gly 286} 60.479 54.158 25.566
{ca gly 286} 60.625 55.503 25.03
{n ala 303} P 63.039 47.008 35.578 {ca ala 303} 63.102 45.539 35.608
{c ala 303} 63.201 45.086 34.163
{o ala 303} 63.437 43.89 33.866
{c ala 303} P 63.201 45.086 34.163 {n gly 304} 63.062 45.998 33.225
{ca gly 304} 63.168 45.624 31.801
{c gly 304} 62.667 46.845 31.04
{o gly 304} 62.154 47.792 31.621
{c gly 304} P 62.667 46.845 31.04 {n val 305} 62.819 46.821 29.742
{ca val 305} 62.448 47.888 28.836
{c val 305} 61.65 47.36 27.65
{o val 305} 61.757 46.166 27.328
{c val 305} P 61.65 47.36 27.65 {n phe 306} 60.944 48.274 27.003
{ca phe 306} 60.193 47.913 25.818
{c phe 306} 60.612 48.841 24.667
{o phe 306} 60.945 50.024 24.823
{c phe 306} P 60.612 48.841 24.667 {n ile 307} 60.591 48.266 23.486
{ca ile 307} 60.885 48.965 22.249
{c ile 307} 59.651 48.995 21.359
{o ile 307} 58.977 47.955 21.181
{c ile 307} P 59.651 48.995 21.359 {n gly 308} 59.398 50.159 20.775
{ca gly 308} 58.266 50.357 19.874
@group {barrel Hb} dominant animate moview= 1
@vectorlist {Hb} color= brown 
<1.884>{met 74 hn} P U 61.81 44.705 26.14 {val 305 o} U 61.773 45.728 26.972
<1.878>{ile 75 hn} P U 58.355 42.891 23.718 {ile 102 o} U 57.955 41.652 23.901
<1.911>{ala 76 hn} P U 57.815 47.022 22.378 {ile 307 o} U 58.628 47.675 21.54
<2.514>{met 103 hn} P U 55.559 38.912 23.884 {ile 123 o} U 55.182 37.334 24.566
<2.349>{thr 104 hn} P U 54.544 43.074 22.662 {ile 75 o} U 55.674 44.15 23.181
<1.782>{leu 105 hn} P U 50.463 42.264 23.022 {phe 125 o} U 50.215 41.627 24.065
<1.750>{phe 125 hn} P U 52.236 40.063 25.27 {met 103 o} U 53.06 40.384 24.422
<2.113>{phe 126 hn} P U 48.581 41.79 27.267 {ala 151 o} U 48.216 41.102 28.524
<1.697>{gln 127 hn} P U 47.81 44.578 24.111 {leu 105 o} U 48.217 44.517 22.997
<2.046>{leu 128 hn} P U 45.998 47.726 26.751 {ala 153 o} U 47.035 47.674 27.737
<1.907>{lys 150 hn} P U 49.789 36.778 28.108 {arg 124 o} U 50.474 37.51 27.226
<1.951>{ile 152 hn} P U 47.724 42.087 31.951 {pro 226 o} U 47.688 41.977 33.312
<1.646>{ala 153 hn} P U 47.862 44.777 28.485 {phe 126 o} U 47.422 44.314 27.525
<2.098>{leu 154 hn} P U 47.709 47.762 31.264 {leu 228 o} U 48.828 48.109 32.149
<2.054>{thr 155 hn} P U 46.127 50.584 28.312 {leu 128 o} U 45.055 49.95 27.593
<1.767>{val 156 hn} P U 48.096 54.188 30.445 {lys 23 o} U 49.306 53.935 30.425
<2.011>{leu 228 hn} P U 48.696 45.586 33.318 {ile 152 o} U 48.33 44.945 32.12
<2.541>{val 229 hn} P U 50.067 48.931 35.469 {gly 248 o} U 51.529 48.277 36.243
<1.772>{lys 230 hn} P U 49.132 51.323 31.81 {leu 154 o} U 48.036 51.154 31.253
<2.058>{gly 231 hn} P U 52.706 53.847 31.665 {ile 250 o} U 53.98 53.404 32.17
<1.501>{ala 247 hn} P U 49.371 45.28 37.841 {ile 227 o} U 49.103 45.556 36.864
<2.017>{ile 249 hn} P U 55.245 48.553 37.143 {pro 281 o} U 56.211 47.617 37.574
<1.987>{ile 250 hn} P U 53.524 51.109 33.854 {val 229 o} U 52.134 51.128 33.82
<1.843>{val 251 hn} P U 57.479 52.323 33.228 {phe 283 o} U 58.546 51.597 33.243
<1.873>{phe 283 hn} P U 57.972 49.481 34.774 {ile 249 o} U 56.701 49.75 34.952
<2.404>{leu 284 hn} P U 60.563 49.531 31.147 {gly 304 o} U 61.677 48.314 31.479
<2.380>{asp 285 hn} P U 59.589 53.221 29.148 {val 251 o} U 58.533 53.922 30.229
<1.763>{ala 303 hn} P U 62.15 47.46 35.502 {val 282 o} U 61.152 48.152 35.722
<1.975>{val 305 hn} P U 63.225 45.994 29.353 {pro 72 o} U 64.034 44.927 29.01
<1.864>{phe 306 hn} P U 60.929 49.218 27.334 {leu 284 o} U 60.761 49.969 28.388
<2.141>{ile 307 hn} P U 60.359 47.294 23.446 {met 74 o} U 60.474 45.842 23.799
@group {barrel side} animate moview= 1
@subgroup {sc layer 1} dominant
@vectorlist {sc 1} color= sky
{ca met 74} P 60.459 43.243 25.265 {cb met 74} 59.548 43.145 26.501
{cg met 74} 60.187 42.251 27.548
{sd met 74} 59.322 42.448 29.099
{ce met 74} 60.182 43.827 29.895
{ca phe 125} P 50.803 40.637 26.738 {cb phe 125} 51.625 41.616 27.543
{cg phe 125} 52.573 41.238 28.621
{cd1 phe 125} 52.575 39.974 29.208
{ce1 phe 125} 53.473 39.654 30.217
{cz phe 125} 54.399 40.577 30.675
{cg phe 125} P 52.573 41.238 28.621 {cd2 phe 125} 53.529 42.158 29.095
{ce2 phe 125} 54.439 41.852 30.096
{cz phe 125} 54.399 40.577 30.675
{ca leu 228} P 50.259 46.79 34.198 {cb leu 228} 51.409 46.263 33.348
{cg leu 228} 51.894 44.846 33.467
{cd1 leu 228} 52.671 44.499 32.212
{cg leu 228} P 51.894 44.846 33.467 {cd2 leu 228} 52.821 44.698 34.662
{ca phe 283} P 59.51 48.978 33.353 {cb phe 283} 58.726 47.988 32.444
{cg phe 283} 58.411 46.692 33.13
{cd1 phe 283} 57.198 46.523 33.794
{ce1 phe 283} 56.911 45.336 34.455
{cz phe 283} 57.825 44.297 34.492
{cg phe 283} P 58.411 46.692 33.13 {cd2 phe 283} 59.345 45.656 33.148
{ce2 phe 283} 59.063 44.456 33.812
{cz phe 283} 57.825 44.297 34.492
@subgroup {sc layer 2} dominant
@vectorlist {sc 2} color= red
{ca thr 104} P 52.685 43.246 23.697 {cb thr 104} 52.93 44.545 24.533
{og1 thr 104} 53.825 44.159 25.604
{cb thr 104} P 52.93 44.545 24.533 {cg2 thr 104} 51.657 45.1 25.141
{ca ala 153} P 48.892 46.339 29.562 {cb ala 153} 50.047 46.524 28.644
{ca ile 250} P 55.332 51.035 32.729 {cb ile 250} 54.883 50.537 31.35
{cg1 ile 250} 54.621 49.001 31.465
{cd1 ile 250} 53.91 48.495 30.153
{cb ile 250} P 54.883 50.537 31.35 {cg2 ile 250} 55.922 50.759 30.205
{ca phe 306} P 60.193 47.913 25.818 {cb phe 306} 58.684 48.023 26.052
{cg phe 306} 58.02 47.08 27.008
{cd1 phe 306} 57.409 45.906 26.532
{ce1 phe 306} 56.804 45.052 27.447
{cz phe 306} 56.746 45.342 28.814
{cg phe 306} P 58.02 47.08 27.008 {cd2 phe 306} 57.973 47.385 28.38
{ce2 phe 306} 57.32 46.539 29.288
{cz phe 306} 56.746 45.342 28.814
@subgroup {sc layer 3} dominant
@vectorlist {sc 3} color= sky
{ca ala 76} P 55.897 47.5 23.092 {cb ala 76} 56.383 48.939 23.278
{ca gln 127} P 47.417 46.269 25.439 {cb gln 127} 48.369 47.188 24.658
{cg gln 127} 48.231 48.659 24.996
{cd gln 127} 47.087 49.29 24.212
{oe1 gln 127} 46.765 48.866 23.076
{cd gln 127} P 47.087 49.29 24.212 {ne2 gln 127} 46.429 50.294 24.763
{ca lys 230} P 51.059 51.982 31.178 {cb lys 230} 50.967 51.279 29.814
{cg lys 230} 51.977 51.765 28.751
{cd lys 230} 52.013 50.846 27.551
{ce lys 230} 52.907 51.299 26.439
{nz lys 230} 52.628 52.701 26.036
{ca asp 285} P 59.93 52.456 27.151 {cb asp 285} 58.717 51.776 26.54
{cg asp 285} 57.374 52.468 26.539
{od1 asp 285} 57.276 53.704 26.828
{cg asp 285} P 57.374 52.468 26.539 {od2 asp 285} 56.346 51.806 26.267
@group {mid layer} dominant animate moview= 1
@vectorlist {sc1} instance= {sc 1}
@vectorlist {sc3} instance= {sc 3}
@spherelist {cpk2 c} color= pinktint radius= 1.6 master= {cpk atoms}
{ca thr 104} 52.685 43.246 23.697 {cb thr 104} 52.93 44.545 24.533
{cg2 thr 104} 51.657 45.1 25.141
{ca ala 153} 48.892 46.339 29.562 {cb ala 153} 50.047 46.524 28.644
{ca ile 250} 55.332 51.035 32.729 {cb ile 250} 54.883 50.537 31.35
{cg1 ile 250} 54.621 49.001 31.465
{cd1 ile 250} 53.91 48.495 30.153
{cg2 ile 250} 55.922 50.759 30.205
{ca phe 306} 60.193 47.913 25.818 {cb phe 306} 58.684 48.023 26.052
{cg phe 306} 58.02 47.08 27.008
{cd1 phe 306} 57.409 45.906 26.532
{ce1 phe 306} 56.804 45.052 27.447
{cz phe 306} 56.746 45.342 28.814
{cd2 phe 306} 57.973 47.385 28.38
{ce2 phe 306} 57.32 46.539 29.288
@spherelist {cpk2 o} color= red radius= 1.4 master= {cpk atoms}
{og1 thr 104} 53.825 44.159 25.604
@group {cpk 3layer} dominant animate moview= 1
@spherelist {c 2} instance= {cpk2 c}
@spherelist {o 2} instance= {cpk2 o}
@spherelist {cpk1 c} color= bluetint radius= 1.6 master= {cpk atoms}
{ca met 74} 60.459 43.243 25.265 {cb met 74} 59.548 43.145 26.501
{cg met 74} 60.187 42.251 27.548
{sd met 74} 59.322 42.448 29.099
{ce met 74} 60.182 43.827 29.895
{ca phe 125} P 50.803 40.637 26.738 {cb phe 125} 51.625 41.616 27.543
{cg phe 125} 52.573 41.238 28.621
{cd1 phe 125} 52.575 39.974 29.208
{ce1 phe 125} 53.473 39.654 30.217
{cz phe 125} 54.399 40.577 30.675
{cd2 phe 125} 53.529 42.158 29.095
{ce2 phe 125} 54.439 41.852 30.096
{ca leu 228} 50.259 46.79 34.198 {cb leu 228} 51.409 46.263 33.348
{cg leu 228} 51.894 44.846 33.467
{cd1 leu 228} 52.671 44.499 32.212
{cd2 leu 228} 52.821 44.698 34.662
{ca phe 283} 59.51 48.978 33.353 {cb phe 283} 58.726 47.988 32.444
{cg phe 283} 58.411 46.692 33.13
{cd1 phe 283} 57.198 46.523 33.794
{ce1 phe 283} 56.911 45.336 34.455
{cz phe 283} 57.825 44.297 34.492
{cd2 phe 283} 59.345 45.656 33.148
{ce2 phe 283} 59.063 44.456 33.812
@spherelist {cpk1 s} color= yellow radius= 2.2 master= {cpk atoms}
{sd met 74} 59.322 42.448 29.099
@spherelist {cpk3 c} color= bluetint radius= 1.6 master= {cpk atoms}
{ca ala 76} 55.897 47.5 23.092 {cb ala 76} 56.383 48.939 23.278
{ca gln 127} 47.417 46.269 25.439 {cb gln 127} 48.369 47.188 24.658
{cg gln 127} 48.231 48.659 24.996
{cd gln 127} 47.087 49.29 24.212
{ca lys 230} P 51.059 51.982 31.178 {cb lys 230} 50.967 51.279 29.814
{cg lys 230} 51.977 51.765 28.751
{cd lys 230} 52.013 50.846 27.551
{ce lys 230} 52.907 51.299 26.439
{ca asp 285} P 59.93 52.456 27.151 {cb asp 285} 58.717 51.776 26.54
{cg asp 285} 57.374 52.468 26.539
@spherelist {cpk3 o} color= red radius= 1.4 master= {cpk atoms}
{oe1 gln 127} 46.765 48.866 23.076
{od1 asp 285} 57.276 53.704 26.828
{od2 asp 285} 56.346 51.806 26.267
@spherelist {cpk3 n} color= sky radius= 1.55 master= {cpk atoms}
{ne2 gln 127} 46.429 50.294 24.763
{nz lys 230} 52.628 52.701 26.036
@group {barrel top} dominant animate moview= 2
@vectorlist {sc1} instance= {sc 1}
@vectorlist {sc2} instance= {sc 2}
@vectorlist {sc3} instance= {sc 3}
@group {context} dominant animate moview= 3
@vectorlist {sc1} instance= {sc 1}
@vectorlist {sc2} instance= {sc 2}
@vectorlist {sc3} instance= {sc 3}
@vectorlist {Calphas} color= white 
{ca met 1} P 78.669 48.258 3.856
{ca glu 2} 76.058 46.779 6.28
{ca ile 3} 73.345 47.725 8.788
{ca thr 4} 75.164 47.911 12.169
{ca asn 5} 72.666 49.788 14.331
{ca val 6} 68.896 49.838 14.932
{ca asn 7} 68.48 53.577 14.211
{ca glu 8} 69.518 52.836 10.621
{ca tyr 9} 66.301 50.851 10.029
{ca glu 10} 64.32 54.08 10.453
{ca ala 11} 66.104 55.72 7.515
{ca ile 12} 65.33 52.787 5.222
{ca ala 13} 61.696 52.577 6.354
{ca lys 14} 61.399 56.252 5.558
{ca gln 15} 62.819 55.94 2.011
{ca lys 16} 60.36 53.114 1.117
{ca leu 17} 57.084 53.645 3.104
{ca pro 18} 54.501 56.095 1.79
{ca lys 19} 54.899 59.434 3.585
{ca met 20} 51.537 59.041 5.391
{ca val 21} 52.557 55.658 6.826
{ca tyr 22} 56.038 56.714 7.857
{ca asp 23} 54.758 59.919 9.524
{ca tyr 24} 52.051 58.001 11.311
{ca tyr 25} 54.638 55.777 13.061
{ca ala 26} 57.451 58.303 13.39
{ca ser 27} 55.556 61.353 14.642
{ca gly 28} 55.442 62.79 18.119
{ca ala 29} 52.992 65.356 19.569
{ca glu 30} 52.899 68.899 18.315
{ca asp 31} 56.472 70.374 18.162
{ca gln 32} 57.886 66.945 19.11
{ca trp 33} 60.207 68.221 21.84
{ca thr 34} 59.774 65.103 24.016
{ca leu 35} 60.195 62.897 20.922
{ca ala 36} 63.758 64.152 20.575
{ca glu 37} 64.432 64.35 24.309
{ca asn 38} 63.388 60.658 24.699
{ca arg 39} 66.622 59.86 22.807
{ca asn 40} 68.791 62.798 23.894
{ca ala 41} 68.32 62.206 27.66
{ca phe 42} 70.28 58.884 27.431
{ca ser 43} 73.442 60.897 26.544
{ca arg 44} 73.293 62.67 29.921
{ca ile 45} 74.054 59.43 31.735
{ca leu 46} 77.643 58.117 31.774
{ca phe 47} 79.204 54.811 32.82
{ca arg 48} 81.468 53.944 35.734
{ca pro 49} 82.807 50.589 34.51
{ca arg 50} 84.636 48.063 36.624
{ca ile 51} 87.622 46.331 35.058
{ca leu 52} 89.37 43.042 35.462
{ca ile 53} 86.302 41.034 36.359
{ca asp 54} 85.895 37.571 34.86
{ca val 55} 83.199 38.19 32.178
{ca thr 56} 83.366 34.832 30.416
{ca asn 57} 79.691 33.972 31.027
{ca ile 58} 77.022 36.716 30.871
{ca asp 59} 73.511 35.838 32.086
{ca met 60} 70.884 38.264 30.653
{ca thr 61} 67.901 36.049 31.591
{ca thr 62} 65.193 37.57 33.732
{ca thr 63} 61.835 36.648 35.186
{ca ile 64} 58.897 38.906 34.462
{ca leu 65} 55.726 38.117 36.428
{ca gly 66} 56.812 34.485 36.884
{ca phe 67} 57.7 34.154 33.178
{ca lys 68} 61.399 33.49 32.56
{ca ile 69} 62.708 35.122 29.393
{ca ser 70} 66.008 35.364 27.546
{ca met 71} 66.681 39.12 28.067
{ca pro 72} 65.127 42.272 29.544
{ca thr 78}P 52.383 49.905 18.437 {ca ala 79} 49.426 49.576 15.959
{ca met 80} 48.277 48.489 12.478
{ca gln 81} 51.599 46.736 11.659
{ca lys 82} 50.222 45.458 8.292
{ca met 83} 50.611 48.998 6.873
{ca ala 84} 54.387 48.399 7.272
{ca his 85} 54.522 44.803 5.959
{ca pro 86} 51.979 42.204 4.659
{ca glu 87} 52.727 39.747 7.473
{ca gly 88} 52.589 42.651 9.97
{ca glu 89} 51.893 41.246 13.478
{ca tyr 90} 52.492 37.572 12.432
{ca ala 91} 56.131 38.447 11.604
{ca thr 92} 56.541 40.36 14.859
{ca ala 93} 55.129 37.436 16.932
{ca arg 94} 57.378 34.81 15.255
{ca ala 95} 60.486 36.999 15.83
{ca ala 96} 59.574 37.616 19.52
{ca ser 97} 59.041 33.857 20.106
{ca ala 98} 62.257 33.062 18.303
{ca ala 99} 64.111 35.576 20.531
{ca gly 100} 62.673 34.15 23.832
{ca thr 101} 61.083 37.488 24.744
{ca trp 108}P 44.572 48.283 17.332 {ca ala 109} 46.557 45.439 15.763
{ca thr 110} 45.647 44.455 12.178
{ca ser 111} 45.831 40.899 13.502
{ca ser 112} 43.627 39.46 16.3
{ca val 113} 44.771 37.657 19.457
{ca glu 114} 43.905 34.234 17.981
{ca glu 115} 45.72 34.77 14.69
{ca val 116} 48.765 36.006 16.722
{ca ala 117} 48.432 32.898 18.961
{ca ser 118} 48.332 30.707 15.781
{ca thr 119} 51.978 31.526 14.981
{ca gly 120} 53.225 29.348 17.892
{ca pro 121} 53.818 29.381 21.632
{ca gly 122} 55.422 32.397 23.311
{ca ile 123} 54.597 34.731 26.203
{ca tyr 129}P 41.996 50.856 26.788 {ca val 130} 38.999 50.905 29.115
{ca tyr 131} 36.575 51.598 26.169
{ca lys 132} 33.238 53.437 26.722
{ca asp 133} 31.185 50.39 25.864
{ca arg 134} 32.283 48.26 28.801
{ca asn 135} 30.742 45.057 27.228
{ca val 136} 33.364 45.433 24.514
{ca val 137} 36.162 45.686 27.07
{ca ala 138} 35.008 42.308 28.51
{ca gln 139} 34.919 40.513 25.147
{ca leu 140} 38.463 41.668 24.289
{ca val 141} 39.701 40.494 27.71
{ca arg 142} 37.953 37.108 27.332
{ca arg 143} 39.272 36.683 23.82
{ca ala 144} 42.771 37.631 25.065
{ca glu 145} 42.608 35.077 27.944
{ca arg 146} 41.407 32.4 25.525
{ca ala 147} 44.172 33.028 23.019
{ca gly 148} 46.657 32.573 25.886
{ca phe 149} 47.779 36.137 26.685
{ca lys 150} 49.411 36.409 30.133
{ca val 156}P 46.296 55.14 31.289 {ca asp 157} 47.687 58.228 29.537
{ca thr 158} 45.091 58.712 26.873
{ca pro 159} 41.746 60.147 28.053
{ca arg 160} 41.986 61.955 24.679
{ca leu 161} 44.398 61.638 21.716
{ca gly 162} 47.381 64.005 21.437
{ca arg 163} 47.772 66.183 18.342
{ca arg 164} 50.242 64.707 15.852
{ca glu 165} 50.122 67.357 13.152
{ca ala 166} 51.581 65.335 10.239
{ca asp 167} 48.505 63.029 10.322
{ca ile 168} 46.259 66.056 9.95
{ca lys 169} 48.345 67.421 7.018
{ca asn 170} 48.591 63.921 5.481
{ca arg 171} 44.857 63.315 5.97
{ca phe 172} 45.734 59.946 7.487
{ca val 173} 43.532 56.909 6.898
{ca leu 174} 43.931 53.129 7.317
{ca pro 175} 44.624 51.527 3.884
{ca pro 176} 41.898 49.547 2.115
{ca phe 177} 42.39 45.825 2.835
{ca leu 178} 43.208 46.274 6.526
{ca thr 179} 41.053 46.067 9.612
{ca leu 180} 41.328 46.375 13.414
{ca lys 181} 40.768 42.582 13.749
{ca asn 182} 40.208 42.464 17.519
{ca phe 183} 37.033 44.534 16.923
{ca glu 184} 35.615 42.076 14.409
{ca gly 185} 33.684 38.987 15.515
{ca ile 186} 32.534 40.591 18.773
{ca asp 187} 29.416 42.413 19.907
{ca leu 188} 29.762 46.164 19.146
{ca gly 198} P 34.216 52.159 9.798 {"} 34.216 52.159 9.798
{ca leu 199} 36.192 50.492 12.65
{ca ser 200} 38.874 53.127 12.906
{ca ser 201} 36.337 55.827 13.57
{ca tyr 202} 34.384 53.59 15.961
{ca val 203} 37.441 52.632 17.99
{ca ala 204} 38.553 56.309 18.109
{ca gly 205} 35.132 57.216 19.618
{ca gln 206} 35.287 54.481 22.305
{ca ile 207} 38.208 56.099 24.135
{ca asp 208} 36.653 57.007 27.453
{ca arg 209} 37.757 60.354 28.818
{ca ser 210} 35.96 59.688 32.129
{ca leu 211} 38.219 56.963 33.502
{ca ser 212} 39.439 57.141 37.07
{ca trp 213} 41.159 54.849 39.558
{ca lys 214} 37.819 53.073 40.255
{ca asp 215} 37.725 51.944 36.573
{ca val 216} 40.984 50.073 37.169
{ca ala 217} 39.295 48.371 40.143
{ca trp 218} 36.428 47.546 37.795
{ca leu 219} 38.815 45.789 35.375
{ca gln 220} 40.098 43.546 38.176
{ca thr 221} 36.46 42.238 38.679
{ca ile 222} 36.311 41.093 35.041
{ca thr 223} 39.783 39.506 34.718
{ca ser 224} 42.22 37.473 36.806
{ca leu 225} 45.256 38.394 34.672
{ca gly 231}P 51.842 55.721 31.1 {ca val 232} 52.863 56.598 34.691
{ca ile 233} 55.551 59.324 35.008
{ca thr 234} 55.1 61.062 38.403
{ca ala 235} 55.764 59.602 41.902
{ca glu 236} 52.166 60.5 42.919
{ca asp 237} 50.514 58.248 40.324
{ca ala 238} 53.039 55.416 40.887
{ca arg 239} 51.944 55.183 44.57
{ca leu 240} 48.258 55.204 43.555
{ca ala 241} 48.999 52.453 41.074
{ca val 242} 50.584 50.398 43.918
{ca gln 243} 47.424 51.043 45.979
{ca his 244} 44.864 50.03 43.303
{ca gly 245} 46.757 46.758 42.861
{ca ala 246} 48.568 47.058 39.54
{ca ala 247} 50.981 44.194 38.837
{ca asn 253}P 55.084 58.89 27.698 {ca his 254} 53.446 56.84 24.934
{ca gly 255} 56.433 57.23 22.586
{ca ala 256} 55.964 61.023 23.024
{ca arg 257} 52.705 61.133 21.064
{ca gln 258} 50.342 62.405 23.808
{ca leu 259} 51.304 65.597 25.689
{ca asp 260} 54.534 67.387 24.66
{ca tyr 261} 56.937 68.603 27.268
{ca val 262} 56.548 65.667 29.641
{ca pro 263} 60.03 64.513 30.691
{ca ala 264} 62.025 61.826 28.86
{ca thr 265} 61.048 58.504 30.453
{ca ile 266} 64.681 57.861 31.404
{ca met 267} 64.576 61.121 33.466
{ca ala 268} 61.278 60.27 35.189
{ca leu 269} 62.273 56.663 35.806
{ca glu 270} 64.046 56.991 39.152
{ca glu 271} 61.285 59.048 40.855
{ca val 272} 58.786 56.333 39.881
{ca val 273} 61.134 53.489 40.874
{ca lys 274} 61.519 55.109 44.326
{ca ala 275} 57.783 55.666 44.844
{ca ala 276} 57.05 51.999 44.049
{ca gln 277} 59.276 51.001 47.016
{ca gly 278} 60.247 47.653 45.5
{ca arg 279} 56.619 46.417 45.826
{ca ile 280} 56.079 45.786 42.079
{ca pro 281} 58.191 45.754 38.897
{ca gly 286}P 60.625 55.503 25.03 {ca gly 287} 63.711 56.091 22.915
{ca val 288} 65.51 52.784 23.692
{ca arg 289} 67.767 52.096 20.703
{ca arg 290} 71.092 50.823 22.073
{ca gly 291} 72.341 48.087 24.402
{ca thr 292} 73.84 51.045 26.343
{ca asp 293} 70.356 52.587 26.717
{ca val 294} 69.067 49.299 28.126
{ca phe 295} 71.908 49.202 30.732
{ca lys 296} 71.265 52.724 31.974
{ca ala 297} 67.532 51.958 32.477
{ca leu 298} 68.272 48.82 34.591
{ca ala 299} 71.012 50.634 36.567
{ca leu 300} 68.301 53.242 37.346
{ca gly 301} 65.91 50.49 38.5
{ca ala 302} 63.863 49.277 35.546
{ca ala 303} 63.102 45.539 35.608
{ca gly 308}P 58.266 50.357 19.874 {ca arg 309} 59.256 52.168 16.658
{ca pro 310} 62.376 50.043 15.745
{ca val 311} 60.056 46.997 15.34
{ca val 312} 57.763 48.723 12.809
{ca phe 313} 60.753 50.264 11.038
{ca ser 314} 62.652 46.98 10.679
{ca leu 315} 59.394 45.191 9.698
{ca ala 316} 58.928 47.648 6.841
{ca ala 317} 62.557 47.223 5.789
{ca glu 318} 63.098 43.495 6.209
{ca gly 319} 59.903 41.663 7.236
{ca glu 320} 60.39 39.117 10.014
{ca ala 321} 64.181 39.041 9.396
{ca gly 322} 64.237 42.767 10.217
{ca val 323} 62.608 42.313 13.694
{ca lys 324} 64.807 39.274 14.313
{ca lys 325} 67.832 41.522 13.526
{ca val 326} 66.651 44.394 15.857
{ca leu 327} 66.344 41.962 18.735
{ca gln 328} 69.719 40.248 17.973
{ca met 329} 71.511 43.634 17.711
{ca met 330} 70.143 44.843 21.088
{ca arg 331} 70.953 41.669 23.012
{ca asp 332} 74.491 41.601 21.429
{ca glu 333} 75.075 45.254 22.254
{ca phe 334} 73.6 44.766 25.757
{ca glu 335} 75.809 41.733 26.494
{ca leu 336} 78.971 43.655 25.414
{ca thr 337} 77.931 46.624 27.648
{ca met 338} 77.527 44.22 30.585
{ca ala 339} 80.993 42.724 29.789
{ca leu 340} 82.666 46.114 29.541
{ca ser 341} 80.946 47.424 32.739
{ca gly 342} 81.94 44.267 34.697
{ca cys 343} 78.456 42.736 35.174
{ca arg 344} 77.807 39.009 35.054
{ca ser 345} 74.069 39.119 35.773
{ca leu 346} 71.249 41.735 35.799
{ca lys 347} 71.509 41.495 39.605
{ca glu 348} 75.08 42.725 39.356
{ca ile 349} 74.027 45.936 37.502
{ca ser 350} 74.069 48.646 40.238
{ca arg 351} 73.338 52.384 40.553
{ca ser 352} 77.076 52.959 41.012
{ca his 353} 77.857 51.795 37.466
{ca ile 354} 76.335 55.014 36.123
{ca ala 355} 76.706 58.732 36.746
{ca ala 356} 73.742 60.924 35.708
{ca asp 357} 74.107 64.615 34.759
{ca trp 358} 71.576 65.362 37.514
{ca asp 359} 73.415 63.365 40.242
@kinemage 3 
@caption (B&T Fig. 4.5)
The 3-domain structure of pyruvate kinase - an N-terminal alpha/beta8 barrel domain (pink), an antiparallel beta domain (skyblue) inserted into a loop of the barrel, and a C-terminal open twisted alpha/beta structure (seagreen).  Views 2-4 are close-ups of each domain.  (from PDB file 1PYK)
@onewidth 
@viewid {Fig. 4.5}
@zoom 0.94
@zslab 120
@center 11.350 -16.050 27.905
@matrix
-.863535 .387215 -.323066 -.060535 .55641 .8287 .500642 .735168 -.45704
@2viewid {a/b barrel}
@2zoom 1.38
@2zslab 90
@2center 13.288 -11.923 31.805
@2matrix
-.517997 .796178 .312697 -.464524 -.568795 .678741 .718259 .20633 .664478
@3viewid {all-beta dom}
@3zoom 1.58
@3zslab 120
@3center 26.975 1.349 47.403
@3matrix
-.8331 -.115163 .541 .544858 -.002432 .838524 -.095251 .993344 .064773
@4viewid {open a/b}
@4zoom 1.19
@4zslab 90
@4center 4.116 -25.652 15.139
@4matrix
.651932 .724335 -.224329 .728466 -.680403 -.079924 -.210526 -.111311 -.971231
@group {pyruvate K} 
@subgroup {barrel dom} dominant
@vectorlist {barrel d} color=pink
{ca unk 1}P -11.5 -19.8 21.8 {ca unk 2}-7.8 -20. 21.2
{ca unk 3}-4.9 -18.7 22.95
{ca unk 4}-1.2 -17. 22.85
{ca unk 5}0.8 -17.5 25.95
{ca unk 6}0.7 -16.8 29.85
{ca unk 7}3.4 -18. 32.15
{ca unk 8}3.8 -17.1 36.05
{ca unk 9}6.5 -19. 38.05
{ca unk 10}7.9 -16.5 40.95
{ca unk 11}6.8 -15.4 44.45
{ca unk 12}7. -17.8 47.45
{ca unk 13}3.1 -18.6 46.95
{ca unk 14}2.8 -17.9 43.35
{ca unk 15}4.8 -21. 41.85
{ca unk 16}3.2 -23.6 43.55
{ca unk 17}-0.4 -23.2 42.75
{ca unk 18}0. -22. 38.95
{ca unk 19}1.4 -25.5 37.95
{ca unk 20}-1.6 -27.3 40.05
{ca unk 21}-4.3 -26.2 37.95
{ca unk 22}-4.2 -22. 36.45
{ca unk 23}-1.3 -20.9 34.15
{ca unk 24}0.9 -23.7 32.45
{ca unk 25}3.9 -22.9 30.45
{ca unk 26}6.4 -23.2 33.25
{ca unk 27}8.5 -20.5 34.05
{ca unk 28}10.9 -21. 37.35
{ca unk 29}12.5 -17.6 38.15
{ca unk 30}14.6 -15.4 40.95
{ca unk 31}18.2 -16.4 42.45
{ca unk 32}18.2 -17.3 46.15
{ca unk 33}19.1 -21. 46.25
{ca unk 34}20.9 -23.2 44.75
{ca unk 35}20.2 -27.1 44.95
{ca unk 36}17.2 -25.9 46.95
{ca unk 37}15.2 -23.2 44.25
{ca unk 38}15.5 -26.5 41.55
{ca unk 39}14.4 -29.3 43.75
{ca unk 40}11.1 -27.5 44.75
{ca unk 41}10. -25.9 41.35
{ca unk 42}10.6 -29.2 39.45
{ca unk 43}8.8 -31.3 42.15
{ca unk 44}5.5 -29.2 41.95
{ca unk 45}5.4 -29. 38.35
{ca unk 46}6.6 -32.6 37.55
{ca unk 47}4.1 -35.1 39.45
{ca unk 48}1. -33. 38.45
{ca unk 49}1.7 -33. 34.65
{ca unk 50}2.6 -36.7 37.75
{ca unk 51}-1.3 -36.3 36.35
{ca unk 52}-1.4 -39.4 33.45
{ca unk 53}0.1 -37.7 30.45
{ca unk 54}-2.5 -38.7 28.05
{ca unk 55}-5.2 -36.2 29.15
{ca unk 56}-4.1 -33.1 27.15
{ca unk 57}-0.3 -31.7 26.85
{ca unk 58}2.2 -29.5 28.55
{ca unk 59}5.9 -28.4 29.55
{ca unk 60}7.7 -27.8 33.15
{ca unk 61}11.2 -26.6 33.35
{ca unk 62}13.1 -23.4 32.15
{ca unk 63}15.7 -21.5 34.45
{ca unk 64}18.3 -18.9 34.6
{ca unk 65}21.7 -17.3 35.8
{ca unk 66}22.8 -13.4 36.9
{ca unk 67}25.6 -10.48 37.5
{ca unk 157}P 29.4 -10.88 35.2 {ca unk 158}30.1 -14.68 36.
{ca unk 159}27.6 -16.4 36.6
{ca unk 160}29.5 -19.9 37.4
{ca unk 161}27.4 -20.7 40.
{ca unk 162}24.1 -20.4 38.
{ca unk 163}25.1 -22.2 34.7
{ca unk 164}26.6 -25.5 36.5
{ca unk 165}23.4 -26. 38.6
{ca unk 166}21.1 -26.1 35.6
{ca unk 167}22.8 -28.6 32.9
{ca unk 168}22.1 -31.4 35.
{ca unk 169}18.1 -32. 35.05
{ca unk 170}16.6 -28.7 33.55
{ca unk 171}16.3 -28.7 29.75
{ca unk 172}15.9 -25. 29.15
{ca unk 173}17.2 -22. 30.65
{ca unk 174}17.4 -17.8 29.6
{ca unk 175}20.5 -15.5 30.3
{ca unk 176}20.4 -11.5 31.
{ca unk 177}23.7 -9.7 31.5
{ca unk 178}24.9 -6.1 30.2
{ca unk 179}26.2 -5.6 26.4
{ca unk 180}26.3 -8.9 23.6
{ca unk 181}29.8 -10.5 24.
{ca unk 182}29.5 -11.2 27.6
{ca unk 183}25.7 -12.9 27.3
{ca unk 184}27. -14.6 24.3
{ca unk 185}30. -16.3 26.1
{ca unk 186}28.4 -17.2 29.3
{ca unk 187}25.3 -19.5 27.7
{ca unk 188}27.3 -21.6 25.3
{ca unk 189}30.1 -22.5 27.9
{ca unk 190}28. -24. 30.7
{ca unk 191}26.2 -26.2 27.9
{ca unk 192}29. -29. 28.2
{ca unk 193}27. -30.1 25.
{ca unk 194}23.6 -28.6 25.7
{ca unk 195}20.8 -27.4 23.1
{ca unk 196}18.3 -24.2 24.2
{ca unk 197}19.8 -21.3 24.9
{ca unk 198}17.8 -18.5 24.6
{ca unk 199}19.4 -14.5 24.6
{ca unk 200}17.5 -11.7 26.1
{ca unk 201}18.9 -8.4 27.3
{ca unk 202}17.8 -5. 28.6
{ca unk 203}20.1 -2.9 29.5
{ca unk 204}21.6 1.7 28.3
{ca unk 205}24.3 -0.3 25.2
{ca unk 206}23.3 -4.6 24.9
{ca unk 207}20. -3.5 22.9
{ca unk 208}21. 0. 21.4
{ca unk 209}23.7 -2.4 19.4
{ca unk 210}20.7 -4.6 18.9
{ca unk 211}23.2 -7.3 16.2
{ca unk 212}24.1 -10. 19.2
{ca unk 213}20.7 -10. 20.5
{ca unk 214}19.5 -10.6 16.9
{ca unk 215}22.1 -13.8 15.8
{ca unk 216}22.3 -15.2 18.8
{ca unk 217}18.6 -15.9 20.25
{ca unk 218}15.3 -14.2 20.55
{ca unk 219}15.2 -10.8 22.75
{ca unk 220}13.4 -10.2 26.05
{ca unk 221}11.7 -6.5 26.45
{ca unk 222}12.4 -4.8 29.95
{ca unk 223}12.4 -1.3 30.95
{ca unk 224}15.4 0.1 33.25
{ca unk 225}18.3 1.6 31.55
{ca unk 226}17.6 4.9 29.55
{ca unk 227}14.1 6.1 30.25
{ca unk 228}11.9 8.1 27.55
{ca unk 229}11.4 6.4 24.15
{ca unk 230}10.2 3.3 24.95
{ca unk 231}8.6 2. 21.55
{ca unk 232}12. 3.4 19.45
{ca unk 233}13.6 -0.4 21.95
{ca unk 234}10.3 -2.7 21.65
{ca unk 235}9.7 -2.4 18.05
{ca unk 236}12.6 -2.1 17.05
{ca unk 237}13.4 -6.5 19.15
{ca unk 238}10. -7.9 18.05
{ca unk 239}10.5 -6.8 14.15
{ca unk 240}13.6 -9.3 15.15
{ca unk 241}11.6 -11.3 17.85
{ca unk 242}8.8 -12.9 15.35
{ca unk 243}11.6 -13.3 13.05
{ca unk 244}11.4 -17.3 13.55
{ca unk 245}13.4 -17.4 16.95
{ca unk 246}10.5 -16.4 19.25
{ca unk 247}10. -13.1 21.45
{ca unk 248}8.9 -12.4 24.95
{ca unk 249}6.9 -9.6 26.85
{ca unk 250}8.1 -8.7 30.35
{ca unk 251}8.4 -6.7 33.45
{ca unk 252}4.8 -6.6 34.6
{ca unk 253}1.4 -6.1 33.3
{ca unk 254}0.4 -6.4 37.
{ca unk 255}0.8 -3.2 39.5
{ca unk 256}0.4 -4.1 43.5
{ca unk 257}-2. -7.6 43.3
{ca unk 258}-5.6 -7.9 44.9
{ca unk 259}-8.1 -9.5 42.4
{ca unk 260}-8.4 -7.4 39.5
{ca unk 261}-5.8 -5.4 36.9
{ca unk 262}-4.7 -1.7 36.05
{ca unk 263}-5.3 1.1 33.95
{ca unk 264}-2.3 2.2 32.05
{ca unk 265}-0.9 -1.5 33.05
{ca unk 266}-3.5 -2.9 30.95
{ca unk 267}-2.9 -1.5 27.45
{ca unk 268}0.8 -1.3 27.65
{ca unk 269}0.5 -5.3 28.05
{ca unk 270}-2. -5. 25.05
{ca unk 271}-0.3 -3.2 22.65
{ca unk 272}3.3 -4.8 22.85
{ca unk 273}2.1 -8.6 22.65
{ca unk 274}0.2 -7.9 19.15
{ca unk 275}3.1 -6. 16.85
{ca unk 276}5.5 -8.8 18.65
{ca unk 277}3.4 -11.7 20.05
{ca unk 278}4.3 -15.5 21.15
{ca unk 279}4.3 -15.5 24.75
{ca unk 280}3.1 -13.8 27.65
{ca unk 281}5.6 -13.2 30.95
{ca unk 282}4.1 -12.1 34.35
{ca unk 283}6.2 -12.5 37.55
{ca unk 284}6.4 -12. 41.45
{ca unk 285}3.5 -12.5 44.1
{ca unk 286}0.5 -10.2 45.3
{ca unk 287}-2.3 -12.9 45.4
{ca unk 288}-1.1 -14.4 42.3
{ca unk 289}-4.8 -15.3 41.3
{ca unk 290}-5.2 -11.9 39.9
{ca unk 291}-1.8 -12. 38.4
{ca unk 292}-2.4 -14.9 35.9
{ca unk 293}-6.2 -13.9 35.2
{ca unk 294}-5. -10. 33.8
{ca unk 295}-2. -11.1 31.8
{ca unk 296}-4. -14.6 30.
{ca unk 297}-7.3 -12.2 29.1
{ca unk 298}-5.7 -9.4 27.6
{ca unk 299}-3.3 -11.3 25.6
{ca unk 300}-5.8 -13.5 23.8
{ca unk 301}-8.8 -11.2 23.2
{ca unk 302}-6.6 -8.3 21.8
{ca unk 303}-4. -10.2 19.4
{ca unk 304}-6.5 -12.9 17.8
{ca unk 305}-9.2 -9.9 17.5
{ca unk 306}-6.7 -7.4 16.8
{ca unk 307}-3.3 -7.35 14.85
@labellist {N-t} color=yellow master= {termini}
{ N-t} -11.5 -19.8 21.8
@subgroup {beta dom} dominant
@vectorlist {beta d} color=sky
{ca unk 67}P 25.6 -10.48 37.5 {ca unk 68}25.5 -7.28 38.4
{ca unk 69}24.3 -4.98 41.2
{ca unk 70}24.6 -6.08 45.1
{ca unk 71}23.9 -4.48 48.6
{ca unk 72}20.9 -4.58 51.3
{ca unk 73}20.8 -4.38 55.3
{ca unk 74}18.1 -1.78 56.6
{ca unk 75}15.7 0.94 55.66
{ca unk 76}14.8 4.54 57.36
{ca unk 77}14.2 7.44 55.76
{ca unk 78}15.2 10.76 55.76
{ca unk 79}16.5 13.04 52.56
{ca unk 80}20.4 13.26 51.76
{ca unk 81}24. 14.6 52.4
{ca unk 82}26.9 11.2 53.4
{ca unk 83}25.7 8.4 55.7
{ca unk 84}26.5 5.4 56.9
{ca unk 85}24.4 2. 55.6
{ca unk 86}23.1 -1.58 56.8
{ca unk 87}25.3 -4.08 57.3
{ca unk 88}24.3 -7.68 56.8
{ca unk 89}27.7 -8.38 55.6
{ca unk 90}29.4 -4.58 56.2
{ca unk 91}33.2 -3.78 57.1
{ca unk 92}36.1 -0.88 56.3
{ca unk 93}34.2 0.7 53.5
{ca unk 94}31.6 -0.58 50.5
{ca unk 95}30.5 -2.68 51.5
{ca unk 96}28.5 -5.38 49.3
{ca unk 97}29.2 -8.18 46.5
{ca unk 98}30.8 -6.98 43.5
{ca unk 99}34.7 -6.18 44.8
{ca unk 100}37.7 -4.68 42.2
{ca unk 101}37.4 -2.68 39.4
{ca unk 102}34.4 -1.18 38.
{ca unk 103}31.8 -0.98 40.5
{ca unk 104}34.4 0.6 43.1
{ca unk 105}36.1 2.7 40.5
{ca unk 106}33.1 5.1 40.5
{ca unk 107}31.7 5.2 43.
{ca unk 108}35.5 6.5 44.
{ca unk 109}35.5 10.1 43.
{ca unk 110}32.8 13.7 43.1
{ca unk 111}29.5 13.7 41.1
{ca unk 112}25.8 14.5 41.6
{ca unk 113}22.3 12.7 39.9
{ca unk 114}22.1 10. 41.3
{ca unk 115}20.4 5.4 40.3
{ca unk 116}19.6 4. 42.
{ca unk 117}17.04 0.7 41.7
{ca unk 118}13.34 1.4 41.6
{ca unk 119}10.54 -0.88 43.9
{ca unk 120}11.94 -0.08 47.3
{ca unk 121}15.94 0.2 46.9
{ca unk 122}16.94 3.1 44.8
{ca unk 123}18.84 5.9 45.9
{ca unk 124}20.04 9.6 44.3
{ca unk 125}22.9 11.2 45.3
{ca unk 126}26.5 11.3 44.8
{ca unk 127}29.3 9. 46.8
{ca unk 128}32.5 8. 46.4
{ca unk 129}36.8 9. 46.8
{ca unk 130}39.2 6.5 48.4
{ca unk 131}38.4 2.2 49.9
{ca unk 132}35. 1. 48.6
{ca unk 133}31.6 2.2 49.1
{ca unk 134}29.2 5.1 48.5
{ca unk 135}28.9 8.2 50.8
{ca unk 136}25.5 10.1 51.3
{ca unk 137}22.9 11.6 48.3
{ca unk 138}19.6 13.4 48.8
{ca unk 139}16.1 12.84 47.26
{ca unk 140}13. 9.84 49.56
{ca unk 141}11.5 7.44 49.56
{ca unk 142}10.7 6.14 52.06
{ca unk 143}10.6 0.54 52.86
{ca unk 144}14.1 -0.64 52.86
{ca unk 145}14.2 -5.04 53.66
{ca unk 146}17.2 -7.04 51.66
{ca unk 147}19.2 -4.24 49.16
{ca unk 148}19.6 -3.54 45.86
{ca unk 149}21.1 -3.68 42.8
{ca unk 150}21.7 -0.88 40.
{ca unk 151}24.6 1.1 38.
{ca unk 152}24.8 4. 35.6
{ca unk 153}26.3 2.1 32.3
{ca unk 154}29.6 -0.58 33.5
{ca unk 155}30.3 -4.08 32.7
{ca unk 156}31.6 -6.68 35.
{ca unk 157}29.4 -10.88 35.2
@subgroup {a/b dom} dominant
@vectorlist {a/b d} color=sea
{ca unk 307}P -3.3 -7.35 14.85 {ca unk 308}-5. -7.75 11.75
{ca unk 309}-3.7 -11.25 10.35
{ca unk 310}-3.3 -10.25 6.55
{ca unk 311}-1.9 -6.45 6.85
{ca unk 312}0.8 -7.55 9.65
{ca unk 313}2.3 -10.65 8.45
{ca unk 314}2.5 -9.45 4.65
{ca unk 315}4.5 -6.25 5.85
{ca unk 316}7.2 -7.85 7.55
{ca unk 317}8. -10.45 4.75
{ca unk 318}8.2 -8.15 1.75
{ca unk 319}10.3 -5.55 3.45
{ca unk 320}13.2 -7.85 4.25
{ca unk 321}13.1 -8.95 0.55
{ca unk 322}11.7 -12.55 -0.75
{ca unk 323}13.9 -15.45 -1.25
{ca unk 324}12.8 -19.25 -1.55
{ca unk 325}13.8 -22.75 -0.35
{ca unk 326}12.3 -25.95 1.25
{ca unk 327}11.5 -24.25 4.65
{ca unk 328}9.9 -21.25 2.95
{ca unk 329}7.7 -23.15 0.75
{ca unk 330}6.1 -25.25 3.75
{ca unk 331}5.4 -22. 6.1
{ca unk 332}3.4 -20.3 3.7
{ca unk 333}1.1 -23.1 2.5
{ca unk 334}0.3 -23.9 6.1
{ca unk 335}-0.6 -20.5 7.3
{ca unk 336}-2.9 -19.6 4.4
{ca unk 337}-4.8 -22.6 4.6
{ca unk 338}-5.6 -22.9 8.4
{ca unk 339}-6.5 -18.9 8.4
{ca unk 340}-9.2 -19.5 5.8
{ca unk 341}-10.7 -22.8 6.5
{ca unk 342}-10.4 -23.3 10.4
{ca unk 343}-6.9 -23. 12.2
{ca unk 344}-5. -26.4 13.2
{ca unk 345}-3.1 -29.2 12.
{ca unk 346}-0.5 -32.5 13.2
{ca unk 347}3.5 -31.9 12.8
{ca unk 348}6.8 -33.1 14.7
{ca unk 349}10.7 -34.1 14.4
{ca unk 350}12.4 -32.2 17.
{ca unk 351}13.3 -28.2 16.1
{ca unk 352}12.4 -26.8 12.7
{ca unk 353}8.5 -27.4 12.1
{ca unk 354}7.5 -26.7 15.7
{ca unk 355}9.7 -23.5 16.1
{ca unk 356}8. -22.4 13.2
{ca unk 357}4.3 -22.7 14.1
{ca unk 358}3.3 -19.2 15.7
{ca unk 359}6.4 -18. 13.3
{ca unk 360}3.5 -18.8 10.6
{ca unk 361}1.3 -16.1 11.9
{ca unk 362}-1.7 -18.3 11.6
{ca unk 363}-4.8 -17.2 13.8
{ca unk 364}-4. -19.7 16.7
{ca unk 365}-2.7 -23.8 16.1
{ca unk 366}0.3 -25.6 16.7
{ca unk 367}0. -29.8 16.3
{ca unk 368}2.8 -32.3 17.1
{ca unk 369}3.5 -35.7 18.8
{ca unk 370}6.4 -38.1 19.
{ca unk 371}8.7 -37.5 22.3
{ca unk 372}8. -34.3 24.5
{ca unk 373}11. -34.2 26.5
{ca unk 374}13.3 -32.6 25.1
{ca unk 375}11.2 -32. 22.2
{ca unk 376}8. -31. 23.8
{ca unk 377}10.1 -28. 25.9
{ca unk 378}11.5 -26.4 22.9
{ca unk 379}8.4 -26.3 20.6
{ca unk 380}5.9 -24.9 22.9
{ca unk 381}8.2 -21.6 22.8
{ca unk 382}6.9 -17.4 21.1
{ca unk 383}3.6 -19.1 20.4
{ca unk 384}0.9 -21.3 21.5
{ca unk 385}0.2 -25.3 20.8
{ca unk 386}0. -29.2 22.1
{ca unk 387}2. -32.1 21.3
{ca unk 388}1. -35.5 22.6
{ca unk 389}4.5 -37.2 22.4
{ca unk 390}3. -40.5 24.
{ca unk 391}3.8 -44.1 23.4
{ca unk 392}3.8 -46.7 20.3
{ca unk 393}5.4 -45.3 16.8
{ca unk 394}3.4 -42.6 15.
{ca unk 395}2.2 -42. 11.3
{ca unk 396}-1.3 -41. 9.7
{ca unk 397}-3.5 -42.3 12.7
{ca unk 398}-1.2 -41.1 15.6
{ca unk 399}-1. -37. 14.2
{ca unk 400}-4.9 -36.3 13.
{ca unk 401}-6. -37.5 16.4
{ca unk 402}-3.9 -35.2 18.6
{ca unk 403}-4.2 -31.7 16.7
{ca unk 404}-8. -32. 16.8
{ca unk 405}-8. -31.9 20.6
{ca unk 406}-11.7 -30.1 21.1
{ca unk 407}-12.2 -27.3 23.6
{ca unk 408}-12.1 -24.5 21.1
{ca unk 409}-11.4 -25.2 17.8
{ca unk 410}-13.8 -27. 15.6
{ca unk 411}-16.5 -30.3 15.3
{ca unk 412}-16.5 -32.7 12.1
{ca unk 413}-13. -32. 10.5
{ca unk 414}-11.3 -31.2 6.8
{ca unk 415}-8. -31.7 5.4
{ca unk 416}-5.9 -29.8 2.8
{ca unk 417}-2.2 -30.7 3.
{ca unk 418}1.4 -30.1 2.3
{ca unk 419}4.8 -32.7 2.7
{ca unk 420}4.6 -36.3 3.
{ca unk 421}6.9 -39.2 3.6
{ca unk 422}10.5 -39.2 5.7
{ca unk 423}13.1 -36.7 4.5
{ca unk 424}13.8 -33.4 6.1
{ca unk 425}10.1 -31.1 6.1
{ca unk 426}6.4 -31.8 5.9
{ca unk 427}3. -30.8 7.7
{ca unk 428}-0.7 -31.1 7.2
{ca unk 429}-3.7 -29. 8.3
{ca unk 430}-7.4 -28.9 7.9
{ca unk 431}-10.6 -27.2 9.3
{ca unk 432}-14.5 -28.1 9.2
@labellist {C-t} color=green master= {termini}
{ C-t} -14.5 -28.1 9.2
@kinemage 4 
@caption (B&T Fig. 4.7)
The bifunctional, two-domain enzyme IGPS-PRAI, where each domain is an 8-strand alpha/beta barrel.  Beta strands are in pink, helices in seagreen, and loops in white (including the N-terminal piece).  Animate to switch between domains.  In the close-up views, note that in each domain the yellow phosphate at the active site is between strands 7 and 8, at their C-terminal ends. (from PDB file 1PII)
@onewidth 
@viewid {Fig. 4.7}
@zoom 1.06 
@zslab 130 
@center 33.435 4.780 8.234
@matrix
.403019 -.607338 .684629 .908734 .354273 -.220664 -.108528 .711077 .694688
@2viewid {side views}
@2zoom 1.06
@2zslab 140
@2center 36.542 7.145 11.797
@2matrix
.725898 -.390243 -.566375 -.33565 .51776 -.786933 .600342 .761338 .244857
@3viewid {IGPS end}
@3zoom 1.57
@3zslab 130
@3center 25.402 9.430 22.475
@3matrix
-.5044 .370354 .780011 -.65181 -.75579 -.062644 .566324 -.540016 .622622
@4viewid {PRAI end}
@4zoom 1.45
@4zslab 120
@4center 44.992 -.534 -6.826
@4matrix
.201812 -.974988 .093111 -.930623 -.220522 -.292079 .305307 -.027705 -.951851
@group dominant {IGPS-PRAI} animate moview= 1
@vectorlist {Nterm} color= white master= {Nterm}
{ca met 1} P 33.925 1.649 45.559 {ca gln 2} 32.297 4.095 43.179
{ca thr 3} 31.927 3.373 39.458
{ca val 4} 33.371 5.815 36.914
{ca leu 5} 29.79 6.968 36.086
{ca ala 6} 29.009 7.719 39.703
{ca lys 7} 32.131 9.719 39.91
{ca ile 8} 31.39 11.771 36.819
{ca val 9} 27.85 12.427 37.938
{ca ala 10} 28.992 13.399 41.465
{ca asp 11} 31.269 15.934 39.824
{ca lys 12} 28.538 17.175 37.586
{ca ala 13} 26.389 18.145 40.551
{ca ile 14} 29.179 20.236 41.803
{ca trp 15} 29.601 21.813 38.392
{ca val 16} 25.787 22.49 38.26
{ca glu 17} 25.647 24.143 41.695
{ca ala 18} 28.548 26.443 40.909
{ca arg 19} 27.227 27.413 37.483
{ca lys 20} 23.859 28.442 38.909
{ca gln 21} 25.796 30.701 41.26
{ca gln 22} 27.571 32.297 38.281
{ca gln 23} 24.484 32.399 35.981
{ca pro 24} 21.266 31.956 37.919
{ca leu 25} 18.331 30.68 35.991
{ca ala 26} 16.258 33.759 36.886
{ca ser 27} 18.692 35.788 34.883
{ca phe 28} 17.864 34.175 31.511
{ca gln 29} 14.956 31.821 31.633
{ca asn 30} 12.577 34.368 30.18
{ca glu 31} 14.73 34.947 27.206
{ca val 32} 15.143 31.271 26.335
{ca gln 33} 13.047 30.587 23.229
{ca pro 34} 12.224 27.309 21.646
{ca ser 35} 14.476 25.537 19.187
{ca thr 36} 13.698 26.05 15.511
{ca arg 37} 15.447 22.848 14.389
{ca his 38} 13.915 19.393 14.248
{ca phe 39} 15.987 16.728 15.925
{ca tyr 40} 13.377 13.927 15.73
{ca asp 41} 12.775 14.737 12.163
{ca ala 42} 16.331 14.615 10.861
{ca leu 43} 16.744 11.051 12.233
{ca gln 44} 13.718 9.679 10.561
{ca gly 45} 14.277 8.629 7.024
{ca ala 46} 14.867 6.004 4.4
{ca arg 47} 18.679 5.833 4.971
{ca thr 48} 20.631 4.963 8.046
@subgroup {IGPS}
@vectorlist {loops1} color= white master= {loops}
{ca lys 55} P 34.542 15.474 21.313 {ca lys 56} 38.019 16.485 22.455
{ca ala 57} 38.624 13.913 25.092
{ca ser 58} 36.963 11.089 26.838
{ca pro 59} 37.273 9.382 30.074
{ca ser 60} 38.533 6.317 28.484
{ca lys 61} 41.103 7.755 26.1
{ca gly 62} 41.973 11.117 27.639
{ca val 63} 42.704 13.827 25.042
{ca ile 64} 41.713 12.481 21.804
{ca arg 65} 42.286 15.55 19.656
{ca asp 66} 44.975 18.14 20.847
{ca asp 67} 44.173 19.796 17.504
{ca phe 68} 40.68 20.958 18.633
{ca asp 69} 38.504 23.366 16.656
{ca tyr 80} P 27.508 14.201 6.099 {ca ala 81} 25.703 14.342 9.38
{ca ser 82} 21.958 13.988 10.106
{ca asp 89} P 31.044 18.241 29.938 {ca glu 90} 34.25 20.05 30.717
{ca lys 91} 36.113 17.868 33.128
{ca tyr 92} 35.897 14.506 31.538
{ca phe 93} 35.391 15.396 27.871
{ca gln 94} 36.883 18.75 27.69
{ca gly 95} 33.858 20.177 26.003
{ca ser 96} 32.147 23.542 26.599
{ca ala 107} P 26.234 23.565 10.447 {ca pro 108} 22.552 23.593 9.797
{ca gln 109} 21.587 20.226 11.305
{ca phe 116} P 25.27 14.294 32.106 {ca ile 117} 21.908 16.055 32.457
{ca ile 118} 20.65 15.852 36.025
{ca asp 119} 18.872 19.135 36.605
{ca gln 130} P 21.52 27.018 20.911 {ca ala 131} 21.222 23.287 21.483
{ca asp 132} 18.276 21.582 19.675
{ca leu 138} P 18.372 6.104 32.158 {ca ser 139} 21.471 4.922 33.951
{ca val 140} 21.559 8.201 35.861
{ca leu 141} 17.868 9.17 36.112
{ca asp 142} 14.893 7.492 37.786
{ca glu 157} P 10.653 22.136 21.305 {ca met 158} 13.976 20.32 21.854
{ca ser 165} P 22.936 .623 28.59 {ca asn 166} 21.217 -2.554 29.591
{ca gly 177} P 7.623 6.197 25.695 {ca ala 178} 10.99 7.495 24.398
{ca lys 179} 10.915 8.304 20.707
{ca asn 185} P 27.662 -.121 23.627 {ca arg 186} 29.979 1.354 26.193
{ca asp 187} 29.038 .916 29.855
{ca leu 188} 30.207 3.995 31.773
{ca arg 189} 30.104 2.123 35.014
{ca asp 190} 33.203 .16 33.921
{ca leu 191} 34.256 1.569 30.49
{ca ser 192} 33.821 -1.765 28.822
{ca ile 193} 32.546 -1.923 25.261
{ca asp 194} 30.373 -4.614 23.718
{ca gly 206} P 10.303 -1.799 17.842 {ca his 207} 9.361 -.026 14.676
{ca asn 208} 8.021 3.057 16.325
{ca val 209} 11.231 3.974 18.1
{ca gly 216} P 32.766 1.449 19.398 {ca ile 217} 31.723 1.85 15.838
{ca asn 218} 34.877 2.054 13.806
{ca thr 219} 34.401 .444 10.393
{ca tyr 220} 32.146 .559 7.424
{ca ala 221} 31.587 -3.22 7.778
{ca gln 222} 30.407 -2.708 11.302
{ca val 223} 28.14 .064 10.099
{ca arg 224} 26.603 -2.254 7.352
{ca glu 225} 26.029 -5.006 9.764
{ca leu 226} 24.559 -2.993 12.624
{ca ser 227} 22.326 -.969 10.399
{ca his 228} 20.04 -4.056 10.399
{ca phe 229} 19.685 -3.592 14.076
{ca ala 230} 19.583 .132 14.397
{ca asn 231} 18.316 3.099 12.524
{ca gly 236} P 32.998 10.39 17.493 {ca ser 237} 36.334 8.961 18.674
{ca ala 238} 37.027 7.052 15.512
{ca leu 239} 36.822 10.372 13.712
{ca met 240} 38.341 12.75 16.256
{ca ala 241} 41.551 10.744 16.414
{ca his 242} 42.359 11.594 12.859
{ca asp 243} 44.006 14.597 11.387
{ca asp 244} 42.111 14.359 8.066
{ca leu 253} P 30.456 5.932 6.171 {ca leu 254} 31.576 4.622 2.832
{ca gly 255} 34.51 2.151 3.43
@vectorlist {beta1} color=pink master= {barrel}
{ca thr 48} P 20.631 4.963 8.046 {ca ala 49} 21.275 8.26 9.927
{ca phe 50} 24.506 9.541 11.479
{ca ile 51} 24.967 11.775 14.492
{ca leu 52} 28.579 12.798 14.316
{ca glu 53} 30.234 13.924 17.536
{ca cys 54} 32.524 16.782 18.441
{ca lys 55} 34.542 15.474 21.313
{ca ser 82} P 21.958 13.988 10.106 {ca ala 83} 22.611 15.699 13.486
{ca ile 84} 25.677 16.926 15.313
{ca ser 85} 26.526 15.969 18.932
{ca val 86} 28.632 18.43 20.938
{ca leu 87} 30.019 17.376 24.261
{ca thr 88} 29.617 20.054 26.903
{ca asp 89} 31.044 18.241 29.938
{ca gln 109} P 21.587 20.226 11.305 {ca pro 110} 20.044 19.925 14.762
{ca ile 111} 22.702 20.16 17.419
{ca leu 112} 22.605 17.73 20.315
{ca cys 113} 23.979 18.735 23.642
{ca lys 114} 25.845 15.658 24.969
{ca asp 115} 26.351 15.824 28.753
{ca phe 116} 25.27 14.294 32.106
{ca asp 132} P 18.276 21.582 19.675 {ca ala 133} 18.334 18.334 21.627
{ca cys 134} 19.744 16.873 24.79
{ca leu 135} 20.784 13.425 26.006
{ca leu 136} 18.957 11.99 28.991
{ca met 137} 20.398 8.792 30.516
{ca leu 138} 18.372 6.104 32.158
{ca ser 139} 21.471 4.922 33.951
{ca met 158} P 13.976 20.32 21.854 {ca gly 159} 14.388 16.609 21.02
{ca val 160} 15.625 13.955 23.444
{ca leu 161} 18.092 11.088 22.909
{ca thr 162} 17.167 8.581 25.612
{ca glu 163} 20.222 6.5 26.434
{ca val 164} 20.094 2.973 27.698
{ca ser 165} 22.936 .623 28.59
{ca lys 179} P 10.915 8.304 20.707 {ca val 180} 14.679 8.152 20.134
{ca val 181} 16.601 5.553 22.081
{ca gly 182} 20.393 5.388 21.942
{ca ile 183} 21.947 2.019 22.816
{ca asn 184} 25.299 2.76 24.431
{ca asn 185} 27.662 -.121 23.627
{ca val 209} P 11.231 3.974 18.1 {ca thr 210} 14.224 5.405 16.295
{ca val 211} 17.145 3.408 17.604
{ca ile 212} 20.661 4.897 17.563
{ca ser 213} 23.73 2.711 18.231
{ca glu 214} 26.473 4.493 20.155
{ca ser 215} 30.196 3.824 20.657
{ca gly 216} 32.766 1.449 19.398
{ca asn 231} P 18.316 3.099 12.524 {ca gly 232} 21.5 5.173 13.061
{ca phe 233} 24.857 5.728 14.753
{ca leu 234} 26.472 8.275 17.06
{ca ile 235} 30.266 8.146 16.255
{ca gly 236} 32.998 10.39 17.493
@vectorlist {helix1} color= sea master= {helices}
{ca asp 69} P 38.504 23.366 16.656 {ca pro 70} 34.722 23.031 16.78
{ca ala 71} 34.25 25.37 13.951
{ca arg 72} 36.438 23.435 11.705
{ca ile 73} 34.962 20.179 12.744
{ca ala 74} 31.559 21.549 12.137
{ca ala 75} 32.576 22.606 8.62
{ca ile 76} 33.301 19.004 7.592
{ca tyr 77} 30.684 17.211 9.588
{ca lys 78} 28. 19.308 7.921
{ca his 79} 28.508 17.55 4.643
{ca tyr 80} 27.508 14.201 6.099
{ca ser 96} P 32.147 23.542 26.599 {ca phe 97} 28.643 25.001 26.385
{ca asn 98} 30.361 27.667 24.353
{ca phe 99} 30.968 25.306 21.516
{ca leu 100} 27.299 24.917 20.804
{ca pro 101} 26.731 28.306 19.2
{ca ile 102} 29.847 27.919 17.218
{ca val 103} 28.808 24.596 15.733
{ca ser 104} 25.24 25.806 15.274
{ca gln 105} 26.35 28.849 13.235
{ca ile 106} 28.274 26.686 10.874
{ca ala 107} 26.234 23.565 10.447
{ca asp 119} P 18.872 19.135 36.605 {ca pro 120} 16.41 21.14 34.568
{ca tyr 121} 18.745 24.119 34.814
{ca gln 122} 21.043 22.282 32.378
{ca ile 123} 18.365 22.059 29.816
{ca tyr 124} 17.491 25.787 29.819
{ca leu 125} 21.22 26.507 29.663
{ca ala 126} 21.621 24.226 26.688
{ca arg 127} 18.711 25.883 24.838
{ca tyr 128} 20.273 29.232 25.836
{ca tyr 129} 23.419 28.067 24.012
{ca gln 130} 21.52 27.018 20.911
{ca asp 142} P 14.893 7.492 37.786 {ca asp 143} 11.543 7.462 35.981
{ca asp 144} 10.223 10.64 37.664
{ca gln 145} 13.376 12.687 36.966
{ca tyr 146} 13.277 11.582 33.429
{ca arg 147} 9.668 12.663 32.82
{ca gln 148} 10.403 16.023 34.339
{ca leu 149} 13.582 16.592 32.372
{ca ala 150} 11.983 15.378 29.222
{ca ala 151} 8.977 17.601 29.721
{ca val 152} 11.367 20.45 30.11
{ca ala 153} 13.147 19.64 26.793
{ca his 154} 9.896 19.212 24.838
{ca ser 155} 8.608 22.474 26.287
{ca leu 156} 11.441 24.071 24.477
{ca glu 157} 10.653 22.136 21.305
{ca asn 166} P 21.217 -2.554 29.591 {ca glu 167} 18.057 -4.562 29.552
{ca glu 168} 16.381 -3.014 32.537
{ca glu 169} 16.968 .464 31.002
{ca gln 170} 15.639 -.661 27.613
{ca glu 171} 12.373 -1.785 29.297
{ca arg 172} 12.02 1.477 31.11
{ca ala 173} 12.536 3.168 27.755
{ca ile 174} 9.677 1.406 26.167
{ca ala 175} 7.589 2.148 29.206
{ca leu 176} 8.48 5.828 29.33
{ca gly 177} 7.623 6.197 25.695
{ca asp 194} P 30.373 -4.614 23.718 {ca leu 195} 28.575 -4.256 20.408
{ca asn 196} 26.265 -7.044 21.404
{ca arg 197} 24.331 -4.539 23.478
{ca thr 198} 23.082 -3.207 20.295
{ca arg 199} 22.604 -6.588 18.705
{ca glu 200} 20.511 -7.891 21.572
{ca leu 201} 18.711 -4.732 22.665
{ca ala 202} 17.869 -2.848 19.519
{ca pro 203} 15.334 -5.322 18.104
{ca lys 204} 13.131 -5.256 21.182
{ca leu 205} 12.655 -1.543 20.657
{ca gly 206} 10.303 -1.799 17.842
{ca thr 219} P 34.401 .444 10.393 {ca tyr 220} 32.146 .559 7.424
{ca ala 221} 31.587 -3.22 7.778
{ca gln 222} 30.407 -2.708 11.302
{ca val 223} 28.14 .064 10.099
{ca arg 224} 26.603 -2.254 7.352
{ca glu 225} 26.029 -5.006 9.764
{ca leu 226} 24.559 -2.993 12.624
{ca ser 227} 22.326 -.969 10.399
{ca his 228} 20.04 -4.056 10.399
{ca phe 229} 19.685 -3.592 14.076
{ca ala 230} 19.583 .132 14.397
{ca asp 244} P 42.111 14.359 8.066 {ca leu 245} 38.387 14.538 9.108
{ca his 246} 36.971 14.23 5.714
{ca ala 247} 38.959 11.011 5.271
{ca ala 248} 38.034 9.632 8.637
{ca val 249} 34.364 10.308 7.965
{ca arg 250} 34.285 8.705 4.59
{ca arg 251} 36.201 5.713 5.887
{ca val 252} 33.435 4.78 8.234
{ca leu 253} 30.456 5.932 6.171
{ca leu 254} 31.576 4.622 2.832
@balllist {P1} color= yellow master= {phosphate}
{p pos 453} 32.832 6.88 20.379
@vectorlist {phos1} color= yellowtint master= {phosphate}
{o1 pos 453}P 31.413 7.216 21.066 {p pos 453} 32.832 6.88 20.379
{o2 pos 453} 33.957 8.007 20.582
{o3 pos 453}P 33.461 5.441 20.911 {p pos 453} 32.832 6.88 20.379
{o4 pos 453} 32.573 6.869 18.83
@labellist off {bar1 lbl} color=pinktint master= {labels}
<54>{b1} 32.524 16.782 18.441
<88>{b2} 29.617 20.054 26.903
<115>{b3} 26.351 15.824 28.753
<138>{b4} 18.372 6.104 32.158
<164>{b5} 20.094 2.973 27.698
<185>{b6} 27.662 -.121 23.627
<216>{b7} 32.766 1.449 19.398
<235>{b8} 30.266 8.146 16.255
@subgroup {PRAI} 
@vectorlist {loops2} color= white master= {loops}
{ca gly 255} P 34.51 2.151 3.43 {ca glu 256} 38.215 2.466 2.511
{ca gly 261} P 44.611 3.74 -12.463 {ca leu 262} 44.358 7.55 -12.262
{ca thr 263} 46.016 9.315 -15.169
{ca arg 264} 44.548 12.84 -14.97
{ca gly 275} P 34.26 10.161 -1.403 {ca ala 276} 37.158 7.858 -2.293
{ca ile 277} 39.915 7.426 .307
{ca val 284} P 53.627 -.997 -14.293 {ca ala 285} 55.206 -.384 -17.722
{ca thr 286} 52.756 -2.861 -19.33
{ca ser 287} 49.688 -.884 -18.324
{ca pro 288} 47.797 1.294 -20.711
{ca arg 289} 47.096 3.153 -17.469
{ca cys 290} 50.782 3.562 -16.663
{ca val 291} 52.135 6.933 -15.402
{ca asn 292} 55.593 8.413 -14.964
{ca pro 304} P 44.293 15.298 -1.32 {ca leu 305} 43.775 11.581 -1.674
{ca gln 306} 46.083 9.012 -.196
{ca arg 312} P 54.804 -5.383 -10.505 {ca asn 313} 58.043 -7.257 -9.527
{ca his 314} 59.754 -3.933 -9.66
{ca asp 315} 63.239 -2.995 -8.59
{ca ser 327} P 55.179 10.965 -1.106 {ca leu 328} 53.062 7.831 -1.612
{ca ala 329} 50.962 6.613 1.301
{ca gly 335} P 53.328 -9.23 -9.198 {ca asn 336} 54.664 -12.321 -7.392
{ca glu 337} 56.703 -10.66 -4.601
{ca glu 338} 57.46 -13.366 -2.034
{ca leu 349} P 61.057 1.991 2.627 {ca pro 350} 60.449 4.747 5.087
{ca ala 351} 58.206 3.494 7.887
{ca his 352} 55.251 5.811 7.078
{ca val 353} 54.737 4.068 3.728
{ca ser 360} P 44.504 -13.252 -7.521 {ca val 361} 41.645 -15.534 -6.647
{ca gly 362} 41.078 -18.665 -8.714
{ca glu 363} 38.795 -21.498 -7.655
{ca thr 364} 40.415 -21.132 -4.319
{ca leu 365} 41.549 -18.001 -2.386
{ca pro 366} 45.176 -17.522 -1.684
{ca ala 367} 46.299 -17.21 1.923
{ca arg 368} 47.297 -13.954 3.496
{ca glu 369} 50.196 -15.133 5.556
{ca phe 370} 52.805 -12.502 4.718
{ca gln 371} 54.704 -10.544 7.33
{ca his 372} 54.916 -6.743 6.888
{ca val 373} 51.82 -6.535 4.693
{ca asp 374} 49.36 -3.974 6.031
{ca asn 380} P 40.375 -11.735 -10.517 {ca gly 381} 43.653 -10.419 -11.631
{ca gln 382} 46.215 -9.775 -14.236
{ca gly 383} 44.575 -6.413 -14.267
{ca gly 384} 41.654 -7.552 -16.276
{ca ser 385} 40.007 -4.622 -17.991
{ca gly 386} 37.378 -7.053 -16.858
{ca gln 387} 34.878 -9.003 -14.88
{ca arg 388} 34.686 -10.839 -11.346
{ca phe 389} 35.674 -13.682 -8.903
{ca asp 390} 33.559 -15.979 -6.648
{ca asn 395} P 33.055 -16.466 3.968 {ca gly 396} 35.09 -17.913 6.803
{ca gln 397} 37.877 -15.306 6.444
{ca ser 398} 38.835 -12.231 8.336
{ca leu 399} 38.385 -9.402 5.905
{ca gly 400} 39.351 -6.364 8.002
{ca asn 401} 42.474 -5.644 5.933
{ca gly 406} P 37.707 -7.092 -9.979 {ca gly 407} 34.987 -5.865 -12.274
{ca leu 408} 33.578 -3.458 -9.679
{ca gly 409} 31.173 -.95 -11.075
{ca ala 410} 27.852 .825 -10.903
{ca asp 411} 25.839 -2.156 -11.774
{ca asn 412} 27.302 -4.455 -9.099
{ca thr 419} P 30.456 -8.884 1.005 {ca gly 420} 31.958 -7.531 4.256
{ca cys 421} 35.426 -6.325 3.066
{ca ala 422} 37.193 -3.207 4.174
{ca asn 427} P 39.239 .664 -12.009 {ca ser 428} 38.108 -.158 -15.507
{ca ala 429} 34.396 -.424 -14.775
{ca val 430} 34.242 3.246 -14.03
{ca glu 431} 36.02 4.318 -17.124
{ca ser 432} 34.962 5.7 -20.527
{ca gln 433} 38.442 4.767 -21.965
{ca pro 434} 41.39 3.086 -20.251
{ca gly 435} 42.883 5.583 -17.819
{ca ile 436} 40.014 7.959 -18.303
{ca lys 437} 37.475 8.04 -15.535
{ca asp 438} 33.783 8.756 -16.024
{ca ala 451} P 22.582 3.899 .196 {ca tyr 452} 21.908 1.835 3.31
@vectorlist {beta2} color= pink master= {barrel}
{ca glu 256} P 38.215 2.466 2.511 {ca asn 257} 37.611 2.807 -1.16
{ca lys 258} 40.205 3.237 -3.81
{ca val 259} 39.889 4.449 -7.358
{ca cys 260} 42.751 2.818 -9.228
{ca gly 261} 44.611 3.74 -12.463
{ca ile 277} P 39.915 7.426 .307 {ca tyr 278} 42.671 6.161 -2.011
{ca gly 279} 43.853 7.028 -5.472
{ca gly 280} 45.963 4.391 -7.351
{ca leu 281} 48.921 5.347 -9.628
{ca ile 282} 50.064 2.529 -11.868
{ca phe 283} 53.836 2.214 -12.477
{ca val 284} 53.627 -.997 -14.293
{ca gln 306} P 46.083 9.012 -.196 {ca tyr 307} 48.015 7.805 -3.147
{ca val 308} 48.968 4.261 -3.72
{ca gly 309} 51.74 3.308 -6.181
{ca val 310} 51.164 .043 -8.064
{ca phe 311} 54.146 -2.018 -8.991
{ca arg 312} 54.804 -5.383 -10.505
{ca ala 329} P 50.962 6.613 1.301 {ca ala 330} 51.375 3.023 .216
{ca val 331} 52.91 .723 -2.385
{ca gln 332} 50.889 -2.085 -3.848
{ca leu 333} 52.767 -5.171 -4.965
{ca his 334} 50.925 -6.642 -7.867
{ca gly 335} 53.328 -9.23 -9.198
{ca val 353} P 54.737 4.068 3.728 {ca ala 354} 52.426 1.055 3.96
{ca ile 355} 52.901 -2.164 1.968
{ca trp 356} 49.901 -3.718 .239
{ca lys 357} 49.818 -7.078 -1.571
{ca ala 358} 47.447 -7.835 -4.468
{ca leu 359} 46.458 -11.495 -4.897
{ca ser 360} 44.504 -13.252 -7.521
{ca asp 374} P 49.36 -3.974 6.031 {ca lys 375} 46.56 -4.545 3.48
{ca tyr 376} 45.486 -6.939 .759
{ca val 377} 43.806 -6.398 -2.609
{ca leu 378} 41.891 -9.467 -3.729
{ca asp 379} 40.867 -9.62 -7.321
{ca asn 380} 40.375 -11.735 -10.517
{ca asn 401} P 42.474 -5.644 5.933 {ca val 402} 41.003 -6.668 2.614
{ca leu 403} 39.938 -4.485 -.352
{ca leu 404} 37.759 -6.224 -2.914
{ca ala 405} 38.549 -5.775 -6.582
{ca gly 406} 37.707 -7.092 -9.979
{ca ala 422} P 37.193 -3.207 4.174 {ca gly 423} 36.65 -1.376 .938
{ca leu 424} 36.305 -1.729 -2.767
{ca asp 425} 38.82 -1.11 -5.587
{ca phe 426} 37.424 .472 -8.778
{ca asn 427} 39.239 .664 -12.009
@vectorlist {helix2} color= sea master= {helices}
{ca arg 264} P 44.548 12.84 -14.97 {ca gly 265} 44.2 15.282 -12.015
{ca gln 266} 40.518 15.951 -12.814
{ca asp 267} 39.741 12.276 -12.292
{ca ala 268} 41.601 12.238 -9.054
{ca lys 269} 39.498 15.245 -8.055
{ca ala 270} 36.388 13.577 -9.214
{ca ala 271} 37.271 10.517 -7.063
{ca tyr 272} 38.035 12.613 -4.029
{ca asp 273} 34.783 14.583 -4.323
{ca ala 274} 32.804 11.444 -4.613
{ca gly 275} 34.26 10.161 -1.403
{ca asn 292} P 55.593 8.413 -14.964 {ca val 293} 56.794 10.496 -12.093
{ca glu 294} 55.952 13.89 -13.596
{ca gln 295} 52.535 12.792 -14.762
{ca ala 296} 51.978 11.402 -11.274
{ca gln 297} 53.023 14.623 -9.689
{ca glu 298} 50.324 16.303 -11.746
{ca val 299} 47.528 13.932 -10.798
{ca met 300} 48.438 14.077 -7.288
{ca ala 301} 48.218 17.77 -6.971
{ca ala 302} 44.583 17.885 -7.993
{ca ala 303} 43.291 16.23 -4.801
{ca pro 304} 44.293 15.298 -1.32
{ca asp 315} P 63.239 -2.995 -8.59 {ca ile 316} 63.318 -2.2 -4.94
{ca ala 317} 65.494 .93 -5.271
{ca asp 318} 63.098 2.42 -7.76
{ca val 319} 60.016 1.471 -5.712
{ca val 320} 61.632 3.243 -2.773
{ca asp 321} 62.545 6.227 -4.833
{ca lys 322} 59.076 6.758 -6.244
{ca ala 323} 57.763 6.425 -2.753
{ca lys 324} 60.025 9.181 -1.436
{ca val 325} 59.653 11.493 -4.367
{ca leu 326} 55.884 11.168 -4.815
{ca ser 327} 55.179 10.965 -1.106
{ca glu 338} P 57.46 -13.366 -2.034 {ca gln 339} 58.348 -12.777 1.575
{ca leu 340} 62.059 -12.111 1.1
{ca tyr 341} 61.281 -9.228 -1.232
{ca ile 342} 58.642 -7.894 1.099
{ca asp 343} 61.071 -8.012 3.904
{ca thr 344} 63.821 -6.179 2.066
{ca leu 345} 61.405 -3.723 .732
{ca arg 346} 60.093 -3.163 4.146
{ca glu 347} 63.652 -2.721 5.442
{ca ala 348} 64.241 -.103 2.734
{ca leu 349} 61.057 1.991 2.627
{ca asp 390} P 33.559 -15.979 -6.648 {ca trp 391} 32.527 -13.862 -3.666
{ca ser 392} 31.156 -16.866 -1.756
{ca leu 393} 34.764 -17.681 -1.256
{ca leu 394} 35.123 -14.87 1.242
{ca asn 395} 33.055 -16.466 3.968
{ca asn 412} P 27.302 -4.455 -9.099 {ca cys 413} 28.546 -2.099 -6.431
{ca val 414} 25.555 -2.948 -4.191
{ca glu 415} 26.394 -6.612 -3.928
{ca ala 416} 30.112 -5.928 -3.612
{ca ala 417} 29.67 -3.496 -.721
{ca gln 418} 27.652 -6.262 .993
{ca thr 419} 30.456 -8.884 1.005
{ca asp 438} P 33.783 8.756 -16.024 {ca ala 439} 32.836 11.24 -13.323
{ca arg 440} 29.271 10.25 -13.495
{ca leu 441} 30.003 6.553 -13.008
{ca leu 442} 32.145 7.599 -10.085
{ca ala 443} 29.448 9.683 -8.474
{ca ser 444} 27.138 6.79 -9.033
{ca val 445} 29.178 4.178 -7.293
{ca phe 446} 29.861 6.372 -4.305
{ca gln 447} 26.202 7.26 -4.042
{ca thr 448} 25.399 3.558 -3.879
{ca leu 449} 28.008 3.03 -1.194
{ca arg 450} 26.012 5.239 1.158
{ca ala 451} 22.582 3.899 .196
{ca tyr 452} 21.908 1.835 3.31
@balllist {P2} color= yellow radius= .3
{p pos 454} 39.012 -3.925 -12.772
@vectorlist {phos2} color= yellowtint master= {phosphate}
{o1 pos 454} P 37.499 -3.958 -13.147 {p pos 454} 39.012 -3.925 -12.772
{o2 pos 454} 39.818 -2.942 -13.682
{o3 pos 454}P 39.16 -3.36 -11.335 {p pos 454} 39.012 -3.925 -12.772
{o4 pos 454} 39.606 -5.375 -12.893
@labellist off {bar2 lbl} color=pinktint master= {labels}
<261>{b1} 44.611 3.74 -12.463
<283>{b2} 53.836 2.214 -12.477
<311>{b3} 54.146 -2.018 -8.991
<333>{b4} 52.767 -5.171 -4.965
<359>{b5} 46.458 -11.495 -4.897
<378>{b6} 41.891 -9.467 -3.729
<404>{b7} 37.759 -6.224 -2.914
<426>{b8} 37.424 .472 -8.778
@group dominant {IGPS} animate moview= 3
@vector {l1} instance= {loops1} master= {loops}
@vector {b1} instance= {beta1} master= {barrel}
@vector {h1} instance= {helix1} master= {helices}
@balllist {p 1} instance= {P1} master= {phosphate}
@vector {ph 1} instance= {phos1} master= {phosphate}
@labellist {lbl1} instance= {bar1 lbl} master= {labels}
@labellist {dom lbl} color=pink
{IGPS} 36.165 -.576 .427
@group dominant {PRAI} animate moview= 4
@vector {l2} instance= {loops2} master= {loops}
@vector {b2} instance= {beta2} master= {barrel}
@vector {h2} instance= {helix2} master= {helices}
@balllist {ph 2} instance= {P2} master= {phosphate}
@vector {ph 2} instance= {phos2} master= {phosphate}
@label {lbl2} instance= {bar2 lbl} master= {labels}
@labellist {dom lbl} color=pink
{PRAI} 21.23 1.77 -11.002
@kinemage 5
@caption  (B&T Fig. 4.8a, 4.8b)
Active site of the enzyme RuBisCo, located at one end of the alpha/beta8 barrel domain (barrel strands cyan, Mg++ yellow, charged side chains skyblue with blue and red balls for N and C atoms, substrate analog pink with yellowtint P atoms, and ligand H-bonds purple).  Animate to see the conformational change when the ligand binds.  (from PDB files 8RUC, 1AUS) 
@onewidth 
@viewid {barrel side}
@zoom 1.17
@zslab 200
@center -29.614 42.161 28.839
@matrix
0.72477 -.591878 -.35269 -.678795 -.701137 -.218275 -.118092 .397604 -.909926
@2viewid {barrel top}
@2zoom 1.07
@2zslab 200
@2center -35.231 42.292 31.553
@2matrix
-0.52707 .478762 -.702127 .19995 -.733147 -.650012 -.825964 -.482993 .290692
@3viewid {site close}
@3zoom 2.55
@3zslab 200
@3center -35.666 36.167 31.002
@3matrix
-0.586543 .454196 -.670577 .138342 -.759604 -.6355 -.798015 -.46552 .382706
@4viewid {PO4 - helix}
@4zoom 3.24
@4zslab 100
@4center -35.333 33.646 23.388
@4matrix
-0.0403 -.32045 .94641 .93692 .31702 .14724 -.34721 .89264 .28746
@group {RuBisCo cmp} dominant animate 
@vectorlist {barrel} color= cyan master= {barrel} 
{ca leu a 169}P -29.63 46.892 21.578 {ca leu a 170}-30.538 43.241 20.946
{ca gly a 171}-29.936 40.357 23.326
{ca cys a 172}-30.882 36.69 23.718
{ca thr a 173}-31.098 34.194 26.584
{ca asp a 198}P -25.347 42.432 20.047 {ca phe a 199}-25.525 40.162 23.087
{ca thr a 200}-26.42 36.684 24.302
{ca kcx a 201}-26.56 35.722 27.981
{ca asp a 202}-26.453 32.957 30.564
{ca lys a 236}P -20.261 41.542 20.68 {ca gly a 237}-20.846 40.538 24.267
{ca his a 238}-22.239 37.605 26.235
{ca tyr a 239}-23.365 38.226 29.817
{ca leu a 240}-21.283 35.859 31.946
{ca asn a 241}-23.144 35.079 35.187
{ca pro a 263}P -17.038 43.4 27.945 {ca ile a 264}-19.906 42.324 30.232
{ca val a 265}-20.936 40.121 33.196
{ca met a 266}-24.247 39.681 34.992
{ca his a 267}-25.566 39.342 38.541
{ca asp a 268}-28.933 38.345 40.017
{ca leu a 290}P -20.28 46.365 32.16 {ca leu a 291}-22.783 44.883 34.618
{ca his a 292}-26.131 43.455 33.54
{ca ile a 293}-28.572 42.97 36.435
{ca his a 294}-31.284 40.307 36.36
{ca arg a 295}-34.217 40.886 38.75
{ca asp a 324}P -25.566 49.081 33.813 {ca his a 325}-28.775 47.257 32.745
{ca ile a 326}-31.851 46.072 34.655
{ca his a 327}-34.828 44.095 33.368
{ca ser a 328}-37.888 46.332 33.183
{ca gly a 329}-40.596 44.053 31.776
{ca leu a 375}P -30.418 50.718 30.457 {ca pro a 376}-33.848 49.022 30.714
{ca val a 377}-34.015 45.487 29.345
{ca ala a 378}-37.292 44.201 27.844
{ca ser a 379}-37.312 40.407 27.908
{ca ser a 398}P -33.189 49.878 25.847 {ca val a 399}-32.103 46.309 25.224
{ca leu a 400}-34.686 43.997 23.619
{ca gln a 401}-34.03 40.297 24.342
{ca phe a 402}-35.179 37.302 22.312
{arw}P -29.616 35.161 24.817
{ca thr a 173} -31.098 34.194 26.584
{arw} -32.347 35.913 25.267
{arw}P -25.087 34.593 29.257
{ca asp a 202} -26.453 32.957 30.564
{arw} -27.935 34.313 29.076
{arw}P -21.516 36.620 34.080
{ca asn a 241} -23.144 35.079 35.187
{arw} -22.776 34.375 32.817
{arw}P -26.706 37.509 39.247
{ca asp a 268} -28.933 38.345 40.017
{arw} -27.539 40.253 39.200
{arw}P -31.958 39.845 38.494
{ca arg a 295} -34.217 40.886 38.750
{arw} -33.337 41.307 36.448
{arw}P -39.505 44.890 33.864
{ca gly a 329} -40.596 44.053 31.776
{arw} -38.775 45.667 31.201
{arw}P -36.696 42.429 26.574
{ca ser a 379} -37.312 40.407 27.908
{arw} -37.906 42.480 29.173
{arw}P -33.354 38.980 22.633
{ca phe a 402} -35.179 37.302 22.312
{arw} -35.764 38.855 24.181
@balllist {N} color= blue master= {main ch} radius= 0.200 
{n gly a 403}-34.974 35.201 23.521
{n gly a 404}-36.424 32.577 23.299
@vectorlist {mc} color= white master= {main ch} 
{ca phe a 402}P -35.179 37.302 22.312 {c phe a 402}-34.537 35.928 22.492
{o phe a 402}-33.648 35.548 21.73
{c phe a 402}P -34.537 35.928 22.492 {n gly a 403}-34.974 35.201 23.521
{ca gly a 403}-34.443 33.869 23.786
{c gly a 403}-35.179 32.87 22.92
{o gly a 403}-34.661 32.424 21.892
{c gly a 403}P -35.179 32.87 22.92 {n gly a 404}-36.424 32.577 23.299
{ca gly a 404}-37.254 31.659 22.529
@vectorlist {rest} color= white master= {domain} 
{ca gln a 149}P -21.338 55.04 43.331 {ca gly a 150}-24.357 54.129 41.19
{ca pro a 151}-24.033 52.342 37.82
{ca pro a 152}-20.435 51.273 37.086
{ca his a 153}-20.791 52.987 33.671
{ca gly a 154}-24.281 54.041 32.614
{ca ile a 155}-25.977 54.489 29.246
{ca gln a 156}-23.661 57.113 27.743
{ca val a 157}-20.426 55.309 28.603
{ca glu a 158}-21.801 51.926 27.563
{ca arg a 159}-22.789 53.106 24.08
{ca asp a 160}-19.351 54.729 23.767
{ca lys a 161}-17.412 51.6 24.79
{ca leu a 162}-19.375 49.357 22.447
{ca asn a 163}-19.652 51.907 19.603
{ca lys a 164}-23.42 51.345 19.286
{ca tyr a 165}-25.781 54.23 18.538
{ca gly a 166}-29.163 55.059 17.076
{ca arg a 167}-31.183 51.945 17.947
{ca pro a 168}-32.153 49.621 20.809
{ca leu a 169}-29.63 46.892 21.578
{ca thr a 173}P -31.098 34.194 26.584 {ca ile a 174}-29.694 30.792 25.58
{ca lys a 175}-32.165 27.891 25.956
{ca pro a 176}-32.899 25.359 27.365
{ca lys a 177}-32.491 27.145 30.712
{ca leu a 178}-30.421 24.31 32.167
{ca gly a 179}-28.92 21.115 30.812
{ca leu a 180}-26.558 22.225 27.999
{ca ser a 181}-22.828 21.474 28.11
{ca ala a 182}-20.222 24.236 28.017
{ca lys a 183}-19.266 23.538 24.395
{ca asn a 184}-22.885 23.439 23.176
{ca tyr a 185}-23.455 26.696 25.027
{ca gly a 186}-20.673 28.393 23.087
{ca arg a 187}-21.876 26.81 19.843
{ca ala a 188}-25.357 28.313 20.388
{ca val a 189}-23.711 31.636 21.347
{ca tyr a 190}-21.577 31.959 18.205
{ca glu a 191}-24.536 31.205 15.938
{ca cys a 192}-26.766 33.776 17.672
{ca leu a 193}-24.209 36.578 17.698
{ca arg a 194}-23.135 36.052 14.081
{ca gly a 195}-26.706 36.721 12.924
{ca gly a 196}-27.014 40.322 14.107
{ca leu a 197}-27.554 40.208 17.87
{ca asp a 198}-25.347 42.432 20.047
{ca asp a 202}P -26.453 32.957 30.564 {ca asp a 203}-29.921 32.165 31.895
{ca glu a 204}-30.298 33.713 35.386
{ca asn a 205}-30.114 30.276 37.015
{ca val a 206}-27.036 29.146 35.057
{ca asn a 207}-24.219 29.542 37.601
{ca ser a 208}-22.047 26.396 37.973
{ca gln a 209}-23.695 22.972 37.947
{ca pro a 210}-22.814 19.299 37.212
{ca phe a 211}-23.874 19.626 33.551
{ca met a 212}-21.756 22.744 33.013
{ca arg a 213}-19.13 24.254 35.322
{ca trp a 214}-18.638 28.007 35.155
{ca arg a 215}-15.003 28.22 34.078
{ca asp a 216}-15.592 25.863 31.155
{ca arg a 217}-18.586 27.932 30.061
{ca phe a 218}-16.694 31.241 30.33
{ca leu a 219}-13.829 29.891 28.221
{ca phe a 220}-16.018 28.505 25.398
{ca cys a 221}-18.286 31.556 25.264
{ca ala a 222}-15.227 33.766 24.983
{ca glu a 223}-14.042 31.759 21.956
{ca ala a 224}-17.508 31.949 20.385
{ca leu a 225}-18.056 35.687 20.855
{ca tyr a 226}-14.631 36.582 19.48
{ca lys a 227}-15.349 34.414 16.416
{ca ala a 228}-18.69 36.177 15.885
{ca gln a 229}-17.113 39.622 16.313
{ca ala a 230}-14.391 38.915 13.747
{ca glu a 231}-16.941 37.594 11.252
{ca thr a 232}-19.468 40.427 11.471
{ca gly a 233}-17.255 43.394 12.282
{ca glu a 234}-19.531 44.511 15.149
{ca ile a 235}-18.602 44.456 18.848
{ca lys a 236}-20.261 41.542 20.68
{ca asn a 241}P -23.144 35.079 35.187 {ca ala a 242}-21.077 35.878 38.275
{ca thr a 243}-23.909 34.958 40.662
{ca ala a 244}-22.609 32.515 43.288
{ca gly a 245}-23.023 31.192 46.809
{ca thr a 246}-20.375 33.33 48.524
{ca cys a 247}-18.729 36.713 47.909
{ca glu a 248}-15.491 34.807 47.231
{ca asp a 249}-16.95 32.566 44.52
{ca met a 250}-18.628 35.59 42.867
{ca met a 251}-15.339 37.521 42.827
{ca lys a 252}-13.451 34.534 41.324
{ca arg a 253}-15.86 34.504 38.391
{ca ala a 254}-15.65 38.259 37.812
{ca val a 255}-11.833 38.031 37.884
{ca phe a 256}-11.692 35.374 35.144
{ca ala a 257}-14.042 37.426 32.955
{ca arg a 258}-11.612 40.34 33.416
{ca glu a 259}-8.738 38.021 32.399
{ca leu a 260}-10.573 37.014 29.215
{ca gly a 261}-11.039 40.652 28.229
{ca val a 262}-14.795 40.297 27.666
{ca pro a 263}-17.038 43.4 27.945
{ca asp a 268}P -28.933 38.345 40.017 {ca tyr a 269}-29.092 41.238 42.546
{ca leu a 270}-31.995 40.072 44.714
{ca thr a 271}-31.144 36.376 45.078
{ca gly a 272}-27.462 37.26 45.431
{ca gly a 273}-28.245 40.189 47.712
{ca phe a 274}-27.48 43.904 47.924
{ca thr a 275}-24.288 43.526 49.958
{ca ala a 276}-22.752 41.24 47.306
{ca asn a 277}-24.205 43.346 44.473
{ca thr a 278}-22.6 46.522 45.771
{ca thr a 279}-19.267 44.697 46.055
{ca leu a 280}-19.485 43.525 42.424
{ca ser a 281}-20.648 46.947 41.174
{ca his a 282}-17.494 48.451 42.696
{ca tyr a 283}-15.272 45.781 41.166
{ca cys a 284}-16.879 46.41 37.768
{ca arg a 285}-16.186 50.147 38.042
{ca asp a 286}-12.533 49.469 38.931
{ca asn a 287}-12.032 46.969 36.105
{ca gly a 288}-14.061 48.385 33.236
{ca leu a 289}-16.686 45.628 33.155
{ca leu a 290}-20.28 46.365 32.16
{ca arg a 295}P -34.217 40.886 38.75 {ca ala a 296}-34.926 37.231 39.611
{ca met a 297}-37.323 36.922 42.575
{ca his a 298}-38.743 40.475 42.231
{ca ala a 299}-42.281 39.222 41.534
{ca val a 300}-42.345 37.35 44.862
{ca ile a 301}-42.174 40.847 46.418
{ca asp a 302}-43.848 43.198 43.919
{ca arg a 303}-46.782 41.456 42.226
{ca gln a 304}-49.725 42.153 44.526
{ca lys a 305}-51.206 45.591 44.992
{ca asn a 306}-51.99 45.124 48.708
{ca his a 307}-48.732 43.809 50.133
{ca gly a 308}-45.03 43.989 49.342
{ca met a 309}-42.825 46.606 47.677
{ca his a 310}-43.436 48.03 44.216
{ca phe a 311}-40.803 47.345 41.553
{ca arg a 312}-40.091 51.096 41.248
{ca val a 313}-38.491 50.933 44.732
{ca leu a 314}-36.337 47.918 43.79
{ca ala a 315}-35.375 49.765 40.588
{ca lys a 316}-34.287 52.894 42.488
{ca ala a 317}-32.331 50.674 44.903
{ca leu a 318}-30.512 49.055 41.946
{ca arg a 319}-29.545 52.408 40.439
{ca leu a 320}-27.981 53.321 43.808
{ca ser a 321}-26.248 49.958 44.445
{ca gly a 322}-25.146 49.766 40.823
{ca gly a 323}-25.874 48.137 37.491
{ca asp a 324}-25.566 49.081 33.813
{ca gly a 329}P -40.596 44.053 31.776 {ca thr a 330}-41.996 44.028 28.217
{ca val a 331}-45.661 44.938 28.809
{ca val a 332}-46.668 42.779 25.831
{ca gly a 333}-44.787 39.594 26.799
{ca lys a 334}-45.348 36.54 29.002
{ca leu a 335}-44.68 38.392 32.266
{ca glu a 336}-46.871 41.076 33.829
{ca gly a 337}-46.218 44.761 33.268
{ca glu a 338}-48.619 47.632 32.704
{ca arg a 339}-47.642 50.283 30.151
{ca asp a 340}-48.176 53.398 32.313
{ca ile a 341}-46.506 52.026 35.435
{ca thr a 342}-43.62 50.676 33.36
{ca leu a 343}-42.948 53.983 31.554
{ca gly a 344}-43.007 55.547 34.996
{ca phe a 345}-40.133 53.483 36.415
{ca val a 346}-38.264 53.488 33.115
{ca asp a 347}-37.99 57.285 33.465
{ca leu a 348}-36.832 56.836 37.062
{ca leu a 349}-34.078 54.55 35.713
{ca arg a 350}-32.801 56.575 32.78
{ca asp a 351}-33.443 60.239 33.565
{ca asp a 352}-31.796 62.743 35.887
{ca tyr a 353}-35.074 64.16 37.149
{ca thr a 354}-38.635 62.838 37.257
{ca glu a 355}-41.461 64.997 38.562
{ca lys a 356}-44.292 63.674 40.718
{ca asp a 357}-46.975 61.951 38.613
{ca arg a 358}-49.666 59.882 40.317
{ca ser a 359}-51.163 58.745 36.992
{ca arg a 360}-48.017 56.66 36.511
{ca gly a 361}-47.611 55.75 40.174
{ca ile a 362}-44.776 58.211 40.825
{ca tyr a 363}-45.439 59.522 44.363
{ca phe a 364}-42.518 61.931 44.7
{ca thr a 365}-40.333 64.041 42.455
{ca gln a 366}-36.946 62.317 42.227
{ca ser a 367}-33.632 63.999 41.323
{ca trp a 368}-30.445 62.035 40.645
{ca val a 369}-27.667 64.677 40.607
{ca ser a 370}-25.996 63.15 37.541
{ca thr a 371}-25.981 59.543 38.752
{ca pro a 372}-25.694 57.651 35.402
{ca gly a 373}-28.885 56.27 33.899
{ca val a 374}-29.519 52.52 33.702
{ca leu a 375}-30.418 50.718 30.457
{ca ser a 379}P -37.312 40.407 27.908 {ca gly a 380}-39.659 37.44 28.085
{ca gly a 381}-42.096 35.953 25.607
{ca ile a 382}-41.474 38.5 22.859
{ca his a 383}-41.146 37.948 19.095
{ca val a 384}-40.871 39.821 15.772
{ca trp a 385}-44.491 41.028 15.643
{ca his a 386}-43.948 42.798 18.991
{ca met a 387}-41.022 44.85 17.597
{ca pro a 388}-42.901 48.064 16.607
{ca ala a 389}-44.605 48.203 20.01
{ca leu a 390}-41.339 47.607 21.901
{ca thr a 391}-39.484 50.244 19.867
{ca glu a 392}-42.403 52.641 20.455
{ca ile a 393}-42.648 52.053 24.217
{ca phe a 394}-38.936 52.023 25.068
{ca gly a 395}-37.236 54.078 22.375
{ca asp a 396}-33.538 53.747 21.503
{ca asp a 397}-32.217 53.43 25.064
{ca ser a 398}-33.189 49.878 25.847
{ca gly a 404}P -37.254 31.659 22.529 {ca gly a 405}-37.69 34.244 19.773
{ca thr a 406}-34.255 33.378 18.339
{ca leu a 407}-33.529 29.734 19.215
{ca gly a 408}-37.105 28.925 18.223
{ca his a 409}-36.667 30.035 14.596
{ca pro a 410}-37.282 27.179 12.089
{ca trp a 411}-33.898 27.694 10.428
{ca gly a 412}-31.717 27.991 13.536
{ca asn a 413}-29.933 30.659 15.597
{ca ala a 414}-28.195 32.717 12.897
{ca pro a 415}-31.363 33.2 10.817
{ca gly a 416}-33.271 33.725 14.08
{ca ala a 417}-30.918 36.595 14.931
{ca val a 418}-31.163 38.113 11.438
{ca ala a 419}-34.972 38.111 11.653
{ca asn a 420}-34.854 40.098 14.916
{ca arg a 421}-32.15 42.497 13.692
{ca val a 422}-33.957 43.155 10.371
{ca ala a 423}-37.322 43.654 12.136
{ca leu a 424}-35.738 46.172 14.548
{ca glu a 425}-33.902 48.111 11.829
{ca ala a 426}-37.076 48.222 9.721
{ca cys a 427}-38.899 49.748 12.702
{ca val a 428}-36.096 52.237 13.358
{ca gln a 429}-36.019 53.319 9.686
{ca ala a 430}-39.819 53.678 9.499
{ca arg a 431}-39.907 55.695 12.728
{ca asn a 432}-37.091 57.974 11.519
{ca glu a 433}-38.927 58.555 8.255
@balllist {N} color= blue master= {charge sc} radius= 0.200 
{nz lys a 175}-34.828 31.265 29.124
{nz kcx a 201}-30.265 36.525 31.222
{nz lys a 177}-35.231 30.552 33.142
{nd1 his a 294}-33.099 37.589 36.587
{ne2 his a 294}-33.753 36.898 34.671
{ne arg a 295}-38.111 42.464 36.021
{nh1 arg a 295}-39.523 44.246 36.421
{nh2 arg a 295}-40.135 42.617 34.928
{nd1 his a 298}-40.264 42.03 39.478
{ne2 his a 298}-39.98 40.564 37.947
{nd1 his a 327}-34.656 40.53 32.305
{ne2 his a 327}-32.554 40.628 31.924
{nz lys a 334}-40.056 33.018 29.242
@balllist {O} color= red master= {charge sc} radius= 0.200 
{ox1 kcx a 201}-32.482 36.95 31.371
{ox2 kcx a 201}-31.784 34.971 31.759
{od1 asp a 203}-32.727 31.815 32.243
{od2 asp a 203}-32.72 30.352 30.649
{oe1 glu a 204}-33.763 33.935 34.318
{oe2 glu a 204}-33.86 31.942 35.185
@vectorlist {sc} color= sky master= {charge sc} 
{ca kcx a 201}P -26.56 35.722 27.981 {cb kcx a 201}-27.482 36.748 28.655
{cg kcx a 201}-28.964 36.41 28.53
{cd kcx a 201}-29.854 37.562 28.997
{ce kcx a 201}-29.864 37.731 30.507
{nz kcx a 201}-30.265 36.525 31.222
{cx kcx a 201}-31.525 36.141 31.426
{ox1 kcx a 201}-32.482 36.95 31.371
{cx kcx a 201}P -31.525 36.141 31.426 {ox2 kcx a 201}-31.784 34.971 31.759
{ca lys a 175}P -32.165 27.891 25.956 {cb lys a 175}-33.566 28.2 25.394
{cg lys a 175}-34.107 29.595 25.742
{cd lys a 175}-34.47 29.713 27.231
{ce lys a 175}-34.638 31.168 27.657
{nz lys a 175}-34.828 31.265 29.124
{ca lys a 177}P -32.491 27.145 30.712 {cb lys a 177}-33.575 27.312 31.785
{cg lys a 177}-34.816 28.086 31.332
{cd lys a 177}-35.848 28.229 32.462
{ce lys a 177}-35.38 29.146 33.582
{nz lys a 177}-35.231 30.552 33.142
{ca asp a 203}P -29.921 32.165 31.895 {cb asp a 203}-30.667 30.826 31.798
{cg asp a 203}-32.143 31.004 31.543
{od1 asp a 203}-32.727 31.815 32.243
{cg asp a 203}P -32.143 31.004 31.543 {od2 asp a 203}-32.72 30.352 30.649
{ca glu a 204}P -30.298 33.713 35.386 {cb glu a 204}-31.477 34.498 35.968
{cg glu a 204}-32.696 33.652 36.394
{cd glu a 204}-33.497 33.136 35.22
{oe1 glu a 204}-33.763 33.935 34.318
{cd glu a 204}P -33.497 33.136 35.22 {oe2 glu a 204}-33.86 31.942 35.185
{ca his a 294}P -31.284 40.307 36.36 {cb his a 294}-30.961 38.835 36.075
{cg his a 294}-32.156 38.018 35.68
{nd1 his a 294}-33.099 37.589 36.587
{ce1 his a 294}-34.049 36.921 35.956
{ne2 his a 294}-33.753 36.898 34.671
{cg his a 294}P -32.156 38.018 35.68 {cd2 his a 294}-32.571 37.572 34.472
{ne2 his a 294}-33.753 36.898 34.671
{ca arg a 295}P -34.217 40.886 38.75 {cb arg a 295}-35.215 42.021 38.471
{cg arg a 295}-36.098 41.778 37.244
{cd arg a 295}-37.092 42.897 36.983
{ne arg a 295}-38.111 42.464 36.021
{cz arg a 295}-39.248 43.121 35.782
{nh1 arg a 295}-39.523 44.246 36.421
{cz arg a 295}P -39.248 43.121 35.782 {nh2 arg a 295}-40.135 42.617 34.928
{ca his a 298}P -38.743 40.475 42.231 {cb his a 298}-38.418 41.512 41.139
{cg his a 298}-39.158 41.291 39.849
{nd1 his a 298}-40.264 42.03 39.478
{ce1 his a 298}-40.735 41.574 38.333
{ne2 his a 298}-39.98 40.564 37.947
{cg his a 298}P -39.158 41.291 39.849 {cd2 his a 298}-38.983 40.371 38.872
{ne2 his a 298}-39.98 40.564 37.947
{ca his a 327}P -34.828 44.095 33.368 {cb his a 327}-35.12 42.622 33.646
{cg his a 327}-34.208 41.681 32.917
{nd1 his a 327}-34.656 40.53 32.305
{ce1 his a 327}-33.646 39.92 31.714
{ne2 his a 327}-32.554 40.628 31.924
{cg his a 327}P -34.208 41.681 32.917 {cd2 his a 327}-32.873 41.734 32.676
{ne2 his a 327}-32.554 40.628 31.924
{ca lys a 334}P -45.348 36.54 29.002 {cb lys a 334}-44.552 35.236 28.854
{cg lys a 334}-43.112 35.317 29.386
{cd lys a 334}-42.304 34.063 29.07
{ce lys a 334}-40.864 34.225 29.555
{nz lys a 334}-40.056 33.018 29.242
@spherelist {Mg++} color= yellow    master= {Mg++}  radius= 0.500     
{Mg    mg a 476 } -33.800, 33.827, 32.033 
@balllist {P} color= yellowtint master= {arab phos} radius= 0.300 
{p1 cap a 1}-37.287 34.068 26.666
{p2 cap a 1}-38.088 39.717 33.485
@balllist {O} color= red master= {arab phos} radius= 0.200 
{o2p cap a 1}-36.636 35.243 25.909
{o3p cap a 1}-38.733 34.389 26.931
{o1p cap a 1}-36.962 32.811 26.011
{o1 cap a 1}-36.595 34.016 28.108
{o5 cap a 1}-38.032 38.16 33.32
{o4p cap a 1}-39.518 40.163 33.493
{o5p cap a 1}-37.399 40.353 32.286
{o6p cap a 1}-37.303 40.039 34.71
{o2 cap a 1}-34.593 34.379 29.851
{o3 cap a 1}-34.875 35.967 32.112
{o4 cap a 1}-37.365 37.655 30.588
{o6 cap a 1}-35.981 33.043 31.87
{o7 cap a 1}-37.742 33.522 30.87
@vectorlist {cap} color= pink master= {arab phos} 
{o2p cap a 1}P -36.636 35.243 25.909 {p1 cap a 1}-37.287 34.068 26.666
{o3p cap a 1}-38.733 34.389 26.931
{o1p cap a 1}P -36.962 32.811 26.011 {p1 cap a 1}-37.287 34.068 26.666
{o1 cap a 1}-36.595 34.016 28.108
{c1 cap a 1}-36.56 35.176 28.937
{c2 cap a 1}-35.835 34.843 30.221
{c3 cap a 1}-35.666 36.167 31.002
{c4 cap a 1}-36.977 36.776 31.546
{c5 cap a 1}-36.864 37.5 32.88
{o5 cap a 1}-38.032 38.16 33.32
{p2 cap a 1}-38.088 39.717 33.485
{o4p cap a 1}-39.518 40.163 33.493
{o5p cap a 1}P -37.399 40.353 32.286 {p2 cap a 1}-38.088 39.717 33.485
{o6p cap a 1}-37.303 40.039 34.71
{o2 cap a 1}P -34.593 34.379 29.851 {c2 cap a 1}-35.835 34.843 30.221
{c cap a 1}-36.559 33.746 31.047
{o6 cap a 1}-35.981 33.043 31.87
{c cap a 1}P -36.559 33.746 31.047 {o7 cap a 1}-37.742 33.522 30.87
{c3 cap a 1}P -35.666 36.167 31.002 {o3 cap a 1}-34.875 35.967 32.112
{c4 cap a 1}P -36.977 36.776 31.546 {o4 cap a 1}-37.365 37.655 30.588
@vectorlist {cap Hb} color= purple master= {lig Hbonds}
{o4p cap a 1}P -39.666 40.754 33.838 {nh2 arg a 295}-39.987 42.026 34.583
{o6p cap a 1}P -37.5 40.63 35.029 {ne arg a 295}-37.914 41.873 35.702
{o5p cap a 1}P -36.7 40.398 32.291 {nd1 his a 327}-35.355 40.485 32.3
{Mg mg a 476}P -34.457 33.591 31.984 {o6 cap a 1}-35.324 33.279 31.919
{o2 cap a 1}P -34.492 34.267 30.52 {Mg mg a 476}-34.081 34.006 31.418
{Mg mg a 476}P -34.114 34.452 32.056 {o3 cap a 1}-34.561 35.342 32.089
{o6 cap a 1}P -35.8 32.441 32.177 {nz lys a 177}-35.412 31.154 32.835
{nz lys a 334}P -39.492 33.141 29.639 {o7 cap a 1}-38.306 33.399 30.473
{o3p cap a 1}P -39.042 34.069 27.471 {nz lys a 334}-39.747 33.338 28.702
{n gly a 404}P -36.56 32.636 23.983 {o1p cap a 1}-36.826 32.752 25.327
{o2p cap a 1}P -36.318 35.116 25.435 {n gly a 403}-35.376 35.176 24.093
{o3 cap a 1}P -34.608 36.188 32.72 {ne2 his a 294}-34.02 36.677 34.063
{nz lys a 175}P -34.816 31.945 29.291 {o2 cap a 1}-34.785 33.767 29.738
@group {RuBisCo apo} dominant animate 
@vectorlist {barrel} color= cyan master= {barrel} 
{ca leu l 169}P -29.72 46.85 21.576 {ca leu l 170}-30.547 43.22 20.915
{ca gly l 171}-29.914 40.195 23.052
{ca cys l 172}-30.687 36.498 22.927
{ca thr l 173}-31.067 34.282 25.99
{ca asp l 198}P -25.382 42.449 20.1 {ca phe l 199}-25.503 40.156 23.147
{ca thr l 200}-26.155 36.622 24.248
{ca lys l 201}-27.048 35.832 27.809
{ca asp l 202}-26.763 33.328 30.617
{ca lys l 236}P -20.322 41.622 20.782 {ca gly l 237}-20.897 40.556 24.322
{ca his l 238}-22.319 37.728 26.395
{ca tyr l 239}-23.752 38.336 29.883
{ca leu l 240}-21.519 36.012 31.921
{ca asn l 241}-23.379 35.168 35.11
{ca pro l 263}P -17.211 43.486 28.039 {ca ile l 264}-19.998 42.362 30.334
{ca val l 265}-20.851 40.305 33.423
{ca met l 266}-24.264 39.621 35.044
{ca his l 267}-25.689 39.441 38.601
{ca asp l 268}-29.044 38.402 40.156
{ca leu l 290}P -20.497 46.582 32.035 {ca leu l 291}-22.95 45.058 34.495
{ca his l 292}-26.194 43.398 33.51
{ca ile l 293}-28.767 43.014 36.291
{ca his l 294}-31.433 40.318 36.35
{ca arg l 295}-34.33 40.722 38.783
{ca asp l 324}P -25.86 49.211 33.626 {ca his l 325}-28.883 47.15 32.443
{ca ile l 326}-31.888 46.09 34.56
{ca his l 327}-34.663 43.695 33.486
{ca ser l 328}-37.895 45.646 33.496
{ca gly l 329}-40.672 43.506 32.07
{ca leu l 375}P -30.718 50.749 30.261 {ca pro l 376}-34.122 48.967 30.699
{ca val l 377}-34.221 45.397 29.379
{ca ala l 378}-37.495 44.117 27.907
{ca ser l 379}-37.905 40.388 27.827
{ca ser l 398}P -33.414 49.848 25.73 {ca val l 399}-32.197 46.299 25.306
{ca leu l 400}-34.668 43.865 23.673
{ca gln l 401}-33.975 40.275 24.797
{ca phe l 402}-35.228 37.398 22.55
{arw}P -29.459 35.184 24.302
{ca thr l 173} -31.067 34.282 25.990
{arw} -32.266 35.769 24.376
{arw}P -25.711 35.322 29.536
{ca asp l 202} -26.763 33.328 30.617
{arw} -28.125 34.052 28.649
{arw}P -21.781 36.760 34.031
{ca asn l 241} -23.379 35.168 35.110
{arw} -22.965 34.489 32.740
{arw}P -26.781 37.608 39.449
{ca asp l 268} -29.044 38.402 40.156
{arw} -27.729 40.304 39.205
{arw}P -32.029 39.793 38.474
{ca arg l 295} -34.330 40.722 38.783
{arw} -33.512 41.216 36.473
{arw}P -39.463 44.170 34.155
{ca gly l 329} -40.672 43.506 32.070
{arw} -38.875 45.158 31.528
{arw}P -37.081 42.385 26.569
{ca ser l 379} -37.905 40.388 27.827
{arw} -38.281 42.461 29.172
{arw}P -33.320 38.941 23.028
{ca phe l 402} -35.228 37.398 22.550
{arw} -35.806 38.908 24.457
@vectorlist {rest} color= white master= {domain} 
{ca gln l 149}P -21.535 55.248 43.024 {ca gly l 150}-24.565 54.429 40.93
{ca pro l 151}-24.169 52.584 37.605
{ca pro l 152}-20.64 51.377 36.82
{ca his l 153}-21.039 53.023 33.4
{ca gly l 154}-24.619 54.004 32.471
{ca ile l 155}-26.369 54.524 29.111
{ca gln l 156}-24.214 57.082 27.294
{ca val l 157}-20.888 55.592 28.34
{ca glu l 158}-22.069 52.11 27.355
{ca arg l 159}-23.103 53.288 23.876
{ca asp l 160}-19.7 55.012 23.409
{ca lys l 161}-17.775 51.925 24.558
{ca leu l 162}-19.762 49.581 22.294
{ca asn l 163}-19.932 52.178 19.475
{ca lys l 164}-23.678 51.471 19.007
{ca tyr l 165}-26.03 54.406 18.346
{ca gly l 166}-29.574 55.231 17.326
{ca arg l 167}-31.4 51.972 18.007
{ca pro l 168}-32.329 49.551 20.797
{ca leu l 169}-29.72 46.85 21.576
{ca thr l 173}P -31.067 34.282 25.99 {ca ile l 174}-29.518 30.868 25.529
{ca lys l 175}-31.808 27.895 26.062
{ca pro l 176}-32.216 25.337 27.382
{ca lys l 177}-30.873 26.917 30.615
{ca leu l 178}-29.69 23.543 31.855
{ca gly l 179}-28.62 20.52 29.932
{ca leu l 180}-26.168 21.684 27.32
{ca ser l 181}-22.46 21.13 27.752
{ca ala l 182}-20.236 24.244 27.894
{ca lys l 183}-19.064 23.837 24.279
{ca asn l 184}-22.591 23.298 22.831
{ca tyr l 185}-23.694 26.313 24.829
{ca gly l 186}-20.856 28.294 23.226
{ca arg l 187}-21.798 27.032 19.754
{ca ala l 188}-25.314 28.497 20.278
{ca val l 189}-23.717 31.764 21.433
{ca tyr l 190}-21.663 32.068 18.23
{ca glu l 191}-24.625 31.302 15.905
{ca cys l 192}-26.693 33.943 17.685
{ca leu l 193}-24.109 36.727 17.674
{ca arg l 194}-22.955 36.231 14.083
{ca gly l 195}-26.504 36.852 12.925
{ca gly l 196}-26.63 40.435 14.081
{ca leu l 197}-27.589 40.442 17.747
{ca asp l 198}-25.382 42.449 20.1
{ca asp l 202}P -26.763 33.328 30.617 {ca asp l 203}-30.087 32.468 32.187
{ca glu l 204}-30.437 33.664 35.807
{ca asn l 205}-30.293 30.027 36.962
{ca val l 206}-26.967 29.417 35.175
{ca asn l 207}-24.201 29.865 37.743
{ca ser l 208}-22.002 26.727 38.187
{ca gln l 209}-23.575 23.241 38.095
{ca pro l 210}-22.498 19.59 37.501
{ca phe l 211}-22.945 19.576 33.738
{ca met l 212}-21.484 23.011 33.113
{ca arg l 213}-19.028 24.521 35.535
{ca trp l 214}-18.668 28.304 35.336
{ca arg l 215}-15.072 28.474 34.079
{ca asp l 216}-15.664 26.133 31.122
{ca arg l 217}-18.725 28.184 30.191
{ca phe l 218}-16.829 31.519 30.442
{ca leu l 219}-14.017 30.117 28.245
{ca phe l 220}-16.198 28.612 25.481
{ca cys l 221}-18.414 31.69 25.472
{ca ala l 222}-15.255 33.811 25.051
{ca glu l 223}-14.127 31.831 22.001
{ca ala l 224}-17.626 32.016 20.445
{ca leu l 225}-18.061 35.771 20.993
{ca tyr l 226}-14.604 36.684 19.606
{ca lys l 227}-15.269 34.474 16.552
{ca ala l 228}-18.624 36.259 15.928
{ca gln l 229}-17.031 39.7 16.47
{ca ala l 230}-14.228 38.926 13.994
{ca glu l 231}-16.786 37.661 11.477
{ca thr l 232}-19.208 40.593 11.634
{ca gly l 233}-16.927 43.507 12.5
{ca glu l 234}-19.367 44.549 15.268
{ca ile l 235}-18.657 44.512 19.009
{ca lys l 236}-20.322 41.622 20.782
{ca asn l 241}P -23.379 35.168 35.11 {ca ala l 242}-21.214 35.874 38.163
{ca thr l 243}-23.938 35.243 40.793
{ca ala l 244}-22.517 32.867 43.384
{ca gly l 245}-22.884 31.531 46.912
{ca thr l 246}-20.27 33.822 48.516
{ca cys l 247}-18.592 37.179 47.834
{ca glu l 248}-15.348 35.272 47.176
{ca asp l 249}-16.819 32.986 44.555
{ca met l 250}-18.588 35.911 42.893
{ca met l 251}-15.357 37.904 42.739
{ca lys l 252}-13.428 34.939 41.261
{ca arg l 253}-15.925 34.831 38.367
{ca ala l 254}-15.761 38.567 37.655
{ca val l 255}-11.944 38.48 37.807
{ca phe l 256}-11.781 35.71 35.165
{ca ala l 257}-14.117 37.82 32.937
{ca arg l 258}-11.679 40.716 33.275
{ca glu l 259}-8.872 38.307 32.398
{ca leu l 260}-10.661 37.224 29.232
{ca gly l 261}-10.999 40.884 28.246
{ca val l 262}-14.751 40.562 27.644
{ca pro l 263}-17.211 43.486 28.039
{ca asp l 268}P -29.044 38.402 40.156 {ca tyr l 269}-29.132 41.324 42.535
{ca leu l 270}-32.083 40.168 44.654
{ca thr l 271}-30.965 36.596 45.266
{ca gly l 272}-27.293 37.514 45.568
{ca gly l 273}-28.377 40.52 47.623
{ca phe l 274}-27.495 44.213 47.921
{ca thr l 275}-24.195 43.903 49.826
{ca ala l 276}-22.743 41.548 47.158
{ca asn l 277}-24.229 43.598 44.282
{ca thr l 278}-22.583 46.835 45.514
{ca thr l 279}-19.239 45.023 45.781
{ca leu l 280}-19.584 43.768 42.209
{ca ser l 281}-20.719 47.202 41.003
{ca his l 282}-17.624 48.868 42.483
{ca tyr l 283}-15.357 46.189 40.921
{ca cys l 284}-17.04 46.702 37.549
{ca arg l 285}-16.395 50.447 37.738
{ca asp l 286}-12.762 49.874 38.576
{ca asn l 287}-12.192 47.359 35.82
{ca gly l 288}-14.332 48.676 32.991
{ca leu l 289}-16.908 45.908 32.975
{ca leu l 290}-20.497 46.582 32.035
{ca arg l 295}P -34.33 40.722 38.783 {ca ala l 296}-35.044 37.047 39.6
{ca met l 297}-37.377 36.697 42.614
{ca his l 298}-38.828 40.24 42.215
{ca ala l 299}-42.36 38.884 41.723
{ca val l 300}-42.234 37.318 45.195
{ca ile l 301}-42.142 40.903 46.479
{ca asp l 302}-43.76 43.236 43.957
{ca arg l 303}-46.692 41.332 42.508
{ca gln l 304}-49.684 41.874 44.804
{ca lys l 305}-51.127 45.369 44.967
{ca asn l 306}-51.856 45.114 48.664
{ca his l 307}-48.567 43.937 50.201
{ca gly l 308}-44.898 44.139 49.322
{ca met l 309}-42.747 46.697 47.516
{ca his l 310}-43.514 48.03 44.088
{ca phe l 311}-40.819 47.393 41.425
{ca arg l 312}-40.074 51.114 41.043
{ca val l 313}-38.585 51.087 44.595
{ca leu l 314}-36.395 48.065 43.739
{ca ala l 315}-35.456 49.872 40.486
{ca lys l 316}-34.249 53.004 42.357
{ca ala l 317}-32.256 50.802 44.726
{ca leu l 318}-30.498 49.118 41.821
{ca arg l 319}-29.654 52.546 40.268
{ca leu l 320}-27.96 53.485 43.537
{ca ser l 321}-26.134 50.237 44.248
{ca gly l 322}-25.242 50.025 40.592
{ca gly l 323}-26.019 48.273 37.328
{ca asp l 324}-25.86 49.211 33.626
{ca gly l 329}P -40.672 43.506 32.07 {ca thr l 330}-42.256 43.532 28.636
{ca val l 331}-45.434 45.678 28.419
{ca val l 332}-46.293 44.279 24.992
{ca glu l 338}P -49.91 48.488 32.79 {"} -49.91 48.488 32.79
{ca arg l 339}-48.078 50.432 30.119
{ca asp l 340}-48.136 53.696 32.067
{ca ile l 341}-46.822 52.303 35.371
{ca thr l 342}-43.947 50.738 33.441
{ca leu l 343}-43.103 53.836 31.44
{ca gly l 344}-43.112 55.671 34.772
{ca phe l 345}-40.331 53.589 36.283
{ca val l 346}-38.478 53.476 32.929
{ca asp l 347}-38.082 57.298 33.281
{ca leu l 348}-36.938 56.813 36.858
{ca leu l 349}-34.167 54.488 35.649
{ca arg l 350}-33.076 56.532 32.665
{ca asp l 351}-33.583 60.238 33.34
{ca asp l 352}-31.877 62.802 35.532
{ca tyr l 353}-35.125 64.281 36.727
{ca thr l 354}-38.691 62.958 36.904
{ca glu l 355}-41.604 64.996 38.092
{ca lys l 356}-44.343 63.672 40.366
{ca asp l 357}-47.045 61.96 38.279
{ca arg l 358}-49.706 59.876 39.954
{ca ser l 359}-51.116 58.733 36.596
{ca arg l 360}-47.786 56.96 36.141
{ca gly l 361}-47.36 55.796 39.703
{ca ile l 362}-44.73 58.466 40.418
{ca tyr l 363}-45.456 59.672 43.966
{ca phe l 364}-42.457 61.968 44.333
{ca thr l 365}-40.406 64.225 42.117
{ca gln l 366}-36.987 62.554 41.85
{ca ser l 367}-33.594 64.143 40.983
{ca trp l 368}-30.47 62.148 40.337
{ca val l 369}-27.856 64.931 40.127
{ca ser l 370}-26.074 63.378 37.162
{ca thr l 371}-25.987 59.736 38.343
{ca pro l 372}-25.918 57.772 35.04
{ca gly l 373}-29.141 56.193 33.802
{ca val l 374}-29.716 52.444 33.515
{ca leu l 375}-30.718 50.749 30.261
{ca ser l 379}P -37.905 40.388 27.827 {ca gly l 380}-40.349 37.506 27.765
{ca gly l 381}-42.199 35.796 24.94
{ca ile l 382}-41.372 38.47 22.405
{ca his l 383}-40.838 38.007 18.656
{ca val l 384}-40.593 39.992 15.438
{ca trp l 385}-44.196 41.21 15.457
{ca his l 386}-43.694 43.077 18.73
{ca met l 387}-40.774 45.007 17.294
{ca pro l 388}-42.672 48.178 16.237
{ca ala l 389}-44.415 48.273 19.626
{ca leu l 390}-41.264 47.751 21.679
{ca thr l 391}-39.332 50.421 19.71
{ca glu l 392}-42.217 52.861 20.066
{ca ile l 393}-42.808 52.22 23.747
{ca phe l 394}-39.155 52.072 24.923
{ca gly l 395}-37.42 54.143 22.282
{ca asp l 396}-33.747 53.759 21.485
{ca asp l 397}-32.416 53.407 24.971
{ca ser l 398}-33.414 49.848 25.73
{ca gly l 404}P -37.325 31.578 21.859 {ca gly l 405}-37.772 34.551 19.504
{ca thr l 406}-34.356 33.644 18.06
{ca leu l 407}-33.637 30.044 19.036
{ca gly l 408}-37.077 29.101 17.699
{ca his l 409}-36.502 30.387 14.178
{ca pro l 410}-36.964 27.522 11.651
{ca trp l 411}-33.603 28.051 9.907
{ca gly l 412}-31.575 28.236 13.135
{ca asn l 413}-29.956 30.893 15.358
{ca ala l 414}-28.059 33.004 12.798
{ca pro l 415}-31.15 33.461 10.594
{ca gly l 416}-33.241 34.007 13.765
{ca ala l 417}-30.799 36.761 14.737
{ca val l 418}-30.866 38.297 11.239
{ca ala l 419}-34.683 38.315 11.207
{ca asn l 420}-34.701 40.229 14.516
{ca arg l 421}-31.932 42.638 13.549
{ca val l 422}-33.609 43.342 10.199
{ca ala l 423}-37.075 43.873 11.717
{ca leu l 424}-35.571 46.278 14.278
{ca glu l 425}-33.639 48.29 11.706
{ca ala l 426}-36.711 48.432 9.407
{ca cys l 427}-38.656 49.925 12.347
{ca val l 428}-35.932 52.437 13.178
{ca gln l 429}-35.668 53.535 9.54
{ca ala l 430}-39.466 53.889 9.236
{ca arg l 431}-39.742 55.806 12.492
{ca asn l 432}-36.939 58.131 11.458
{ca glu l 433}-38.719 58.719 8.178
@balllist {mc N} color= blue master= {main ch} radius= 0.200 
{n gly l 403}-35.358 35.167 23.572
{n gly l 404}-36.65 32.41 22.846
@vectorlist {mc} color= white master= {main ch} 
{ca phe l 402}-35.228 37.398 22.55 {c phe l 402}-34.693 35.986 22.768
{o phe l 402}-33.707 35.607 22.13
{c phe l 402}P -34.693 35.986 22.768 {n gly l 403}-35.358 35.167 23.572
{ca gly l 403}-34.869 33.798 23.744
{c gly l 403}-35.433 32.911 22.624
{o gly l 403}-34.795 32.69 21.578
{c gly l 403}P -35.433 32.911 22.624 {n gly l 404}-36.65 32.41 22.846
{ca gly l 404}-37.325 31.578 21.859
@balllist {N} color= blue master= {charge sc} radius= 0.200 
{nz lys l 175}-35.429 31.39 27.602
{nz lys l 177}-35.089 29.552 33.811
{nz lys l 201}-30.962 36.382 31.656
{nd1 his l 294}-33.134 37.532 36.446
{ne2 his l 294}-33.685 36.822 34.505
{ne arg l 295}-38.286 42.391 36.161
{nh1 arg l 295}-39.712 44.131 36.694
{nh2 arg l 295}-40.311 42.564 35.132
{nd1 his l 298}-40.505 41.565 39.449
{ne2 his l 298}-40.193 40.037 37.979
{nd1 his l 327}-34.662 40.448 32.073
{ne2 his l 327}-32.557 40.151 31.819
@balllist {O} color= red master= {charge sc} radius= 0.200 
{o1 cbx l 201}-33.181 36.418 31.137
{o2 cbx l 201}-32.283 34.608 31.806
{od1 asp l 203}-32.963 31.655 32.184
{od2 asp l 203}-32.181 30.597 33.91
{oe1 glu l 204}-33.436 33.793 34.462
{oe2 glu l 204}-34.894 32.837 35.775
@vectorlist {sc} color= sky master= {charge sc} 
{ca lys l 175}P -31.808 27.895 26.062 {cb lys l 175}-33.3 28.189 26.139
{cg lys l 175}-33.902 28.974 25.008
{cd lys l 175}-35.022 29.843 25.617
{ce lys l 175}-34.461 30.498 26.868
{nz lys l 175}-35.429 31.39 27.602
{ca lys l 177}P -30.873 26.917 30.615 {cb lys l 177}-31.693 27.584 31.722
{cg lys l 177}-32.969 26.851 32.114
{cd lys l 177}-33.717 27.563 33.235
{ce lys l 177}-34.509 28.745 32.702
{nz lys l 177}-35.089 29.552 33.811
{ca lys l 201}P -27.048 35.832 27.809 {cb lys l 201}-28.301 36.649 28.073
{cg lys l 201}-28.838 36.577 29.471
{cd lys l 201}-30.165 37.243 29.51
{ce lys l 201}-30.521 37.553 30.925
{nz lys l 201}-30.962 36.382 31.656
{c cbx l 201}-32.141 35.787 31.483
{o1 cbx l 201}-33.181 36.418 31.137
{c cbx l 201}P -32.141 35.787 31.483 {o2 cbx l 201}-32.283 34.608 31.806
{ca asp l 203}P -30.087 32.468 32.187 {cb asp l 203}-30.725 31.11 32.111
{cg asp l 203}-32.046 31.095 32.776
{od1 asp l 203}-32.963 31.655 32.184
{cg asp l 203}P -32.046 31.095 32.776 {od2 asp l 203}-32.181 30.597 33.91
{ca glu l 204}P -30.437 33.664 35.807 {cb glu l 204}-31.607 34.424 36.44
{cg glu l 204}-32.846 33.6 36.772
{cd glu l 204}-33.79 33.397 35.589
{oe1 glu l 204}-33.436 33.793 34.462
{cd glu l 204}P -33.79 33.397 35.589 {oe2 glu l 204}-34.894 32.837 35.775
{ca his l 294}P -31.433 40.318 36.35 {cb his l 294}-31.05 38.881 36.01
{cg his l 294}-32.196 38.034 35.569
{nd1 his l 294}-33.134 37.532 36.446
{ce1 his l 294}-34.018 36.811 35.782
{ne2 his l 294}-33.685 36.822 34.505
{cg his l 294}P -32.196 38.034 35.569 {cd2 his l 294}-32.55 37.581 34.343
{ne2 his l 294}-33.685 36.822 34.505
{ca arg l 295}P -34.33 40.722 38.783 {cb arg l 295}-35.337 41.867 38.544
{cg arg l 295}-36.285 41.613 37.364
{cd arg l 295}-37.273 42.747 37.149
{ne arg l 295}-38.286 42.391 36.161
{cz arg l 295}-39.423 43.051 35.973
{nh1 arg l 295}-39.712 44.131 36.694
{cz arg l 295}P -39.423 43.051 35.973 {nh2 arg l 295}-40.311 42.564 35.132
{ca his l 298}P -38.828 40.24 42.215 {cb his l 298}-38.602 41.226 41.066
{cg his l 298}-39.365 40.889 39.825
{nd1 his l 298}-40.505 41.565 39.449
{ce1 his l 298}-40.987 41.03 38.338
{ne2 his l 298}-40.193 40.037 37.979
{cg his l 298}P -39.365 40.889 39.825 {cd2 his l 298}-39.173 39.929 38.893
{ne2 his l 298}-40.193 40.037 37.979
{ca his l 327}P -34.663 43.695 33.486 {cb his l 327}-34.807 42.218 33.861
{cg his l 327}-34.045 41.296 32.963
{nd1 his l 327}-34.662 40.448 32.073
{ce1 his l 327}-33.748 39.771 31.395
{ne2 his l 327}-32.557 40.151 31.819
{cg his l 327}P -34.045 41.296 32.963 {cd2 his l 327}-32.712 41.101 32.799
{ne2 his l 327}-32.557 40.151 31.819
@spherelist {Mg} color= yellow master= {Mg++}  radius= .5   
{Mg mg l 476 } -34.266 33.517 32.188

@kinemage 6
@caption  (B&T Fig. 4.10-4.12)
Ribonuclease inhibitor (in white), an alpha/beta horseshoe fold or leucine-rich repeat.  Animate, for a tour showing the binding of ribonuclease (greentint) with a sulfate (orange) at its active site, and for a close-up of the conserved side chains of the two alternating leucine-rich repeats.  In the final view, the 7 core Leu side chains of repeat B are shown as space-filling spheres.  (from PDB file 1DFJ) 
@viewid {Fig. 4.11}
@zoom 1.1
@zslab 160 
@center 18.9 37.94 13.098 
@matrix 
0.672962 -.50745 -.538159 -.528498 .179157 -.829815 .517505 .84285 -.147619 
@2viewid {top}
@2zoom 1.1
@2zslab 140 
@2center 20.466 39.347 11.383 
@2matrix 
-0.371212 .562433 -.738831 -.013441 -.798855 -.601374 -.928451 -.213307 .304104 
@3viewid {site view}
@3zoom 1.2
@3zslab 200 
@3center 16.209 33.791 12.36
@3matrix 
0.48641 .507185 -.711455 .114996 .770028 .627561 .86613 -.387066 .316225 
@4viewid {rpt A closeup}
@4zoom 2.57 
@4zslab 125 
@4center 21.850 50.981 27.192 
@4matrix 
-.314681 -.809715 .495317 .77071 -.522559 -.364604 .554059 .267011 0.788495 
@5viewid {rpt B closeup}
@5zoom 2.57
@5zslab 131
@5center 20.448 51.982 24.751
@5matrix
-0.27588 -.81925 .50271 .73797 -.51564 -.43534 .61587 .25088 .74684
@group {Inhibitor} dominant animate moview= 1 
@subgroup {inhib}
@vectorlist {Calphas} color= white 
{ca met i 1} P 41.987 29.854 1.838
{ca asn i 2} 38.644 29.719 3.681
{ca leu i 3} 37.084 26.452 4.621
{ca asp i 4} 33.359 26.612 4.803
{ca ile i 5} 31.453 23.364 4.944
{ca his i 6} 28.156 24.502 6.453
{ca cys i 7} 25.107 22.211 6.945
{ca glu i 8} 26.882 19.372 5.029
{ca gln i 9} 27.11 16.079 7.009
{ca leu i 10} 30.802 15.515 6.139
{ca ser i 11} 31.798 12.215 4.619
{ca asp i 12} 34.773 10.559 6.199
{ca ala i 13} 36.594 11.022 2.873
{ca arg i 14} 35.906 14.758 2.631
{ca trp i 15} 37.133 15.136 6.218
{ca thr i 16} 40.409 13.411 5.3
{ca glu i 17} 40.775 15.378 2.08
{ca leu i 18} 40.211 18.48 4.294
{ca leu i 19} 42.633 17.613 7.056
{ca pro i 20} 45.974 18.78 5.532
{ca leu i 21} 44.236 21.998 4.445
{ca leu i 22} 43.34 22.809 8.028
{ca gln i 23} 47.053 23.562 8.441
{ca gln i 24} 46.845 25.94 5.482
{ca tyr i 25} 43.391 27.681 5.802
{ca glu i 26} 43.246 31.271 7.225
{ca val i 27} 39.594 30.84 8.148
{ca val i 28} 37.618 27.708 8.995
{ca arg i 29} 33.91 27.515 9.588
{ca leu i 30} 32.89 23.991 10.148
{ca asp i 31} 29.308 25.015 11.174
{ca asp i 32} 26.736 22.185 11.671
{ca cys i 33} 28.611 19.353 9.977
{ca gly i 34} 28.755 15.787 11.226
{ca leu i 35} 31.475 17.029 13.601
{ca thr i 36} 32.12 15.259 16.86
{ca glu i 37} 34.903 14.393 19.227
{ca glu i 38} 36.493 12.263 16.518
{ca his i 39} 36.865 15.17 14.134
{ca cys i 40} 37.994 17.332 17.044
{ca lys i 41} 41.042 15.161 17.473
{ca asp i 42} 42.268 16.035 13.967
{ca ile i 43} 41.122 19.591 14.28
{ca gly i 44} 43.244 19.883 17.425
{ca ser i 45} 46.341 18.429 15.828
{ca ala i 46} 45.871 20.477 12.692
{ca leu i 47} 45.255 23.517 14.875
{ca arg i 48} 48.71 23.408 16.522
{ca ala i 49} 50.545 23.327 13.207
{ca asn i 50} 48.705 26.151 11.341
{ca pro i 51} 50.642 29.443 11.53
{ca ser i 52} 48.128 31.617 9.673
{ca leu i 53} 44.611 30.727 10.918
{ca thr i 54} 42.79 33.729 12.402
{ca glu i 55} 39.273 32.513 12.939
{ca leu i 56} 37.965 29.103 13.946
{ca cys i 57} 34.165 28.496 14.072
{ca leu i 58} 33.061 25.044 15.175
{ca arg i 59} 29.41 26.067 15.401
{ca thr i 60} 26.376 23.836 16.005
{ca asn i 61} 28.35 20.635 16.463
{ca glu i 62} 28.043 18.13 19.3
{ca leu i 63} 31.81 18.56 19.89
{ca gly i 64} 31.024 17.97 23.539
{ca asp i 65} 33.105 18.421 26.721
{ca ala i 66} 35.803 15.976 25.503
{ca gly i 67} 35.955 17.171 21.892
{ca val i 68} 36.19 20.825 22.895
{ca his i 69} 39.004 20.052 25.33
{ca leu i 70} 41.135 18.658 22.481
{ca val i 71} 40.228 21.419 19.914
{ca leu i 72} 41.293 23.894 22.577
{ca gln i 73} 44.614 22.23 23.066
{ca gly i 74} 45.144 22.776 19.365
{ca leu i 75} 45.012 26.55 19.889
{ca gln i 76} 47.481 26.062 22.75
{ca ser i 77} 50.698 26.373 20.76
{ca pro i 78} 52.791 29.539 20.226
{ca thr i 79} 52.19 29.135 16.524
{ca cys i 80} 48.469 29.77 17.011
{ca lys i 81} 47.742 33.434 16.417
{ca ile i 82} 43.894 33.144 16.203
{ca gln i 83} 41.741 36.251 16.699
{ca lys i 84} 38.163 35.05 16.52
{ca leu i 85} 36.864 31.835 17.983
{ca ser i 86} 33.274 30.605 18.112
{ca leu i 87} 31.881 27.481 19.663
{ca gln i 88} 28.25 28.391 19.664
{ca asn i 89} 25.953 25.464 20.454
{ca cys i 90} 28.872 23.068 20.841
{ca ser i 91} 27.317 21.235 23.773
{ca leu i 92} 29.994 22.601 26.168
{ca thr i 93} 29.063 22.273 29.897
{ca glu i 94} 30.634 23.884 33.024
{ca ala i 95} 32.839 20.813 32.987
{ca gly i 96} 34.766 21.379 29.76
{ca cys i 97} 35.182 24.996 30.848
{ca gly i 98} 38.111 23.721 32.873
{ca val i 99} 40.635 24.65 30.145
{ca leu i 100} 39.385 28.2 29.443
{ca pro i 101} 41.893 29.777 31.925
{ca ser i 102} 45.025 27.97 30.59
{ca thr i 103} 43.721 28.769 27.129
{ca leu i 104} 43.005 32.542 27.418
{ca arg i 105} 46.491 32.889 28.968
{ca ser i 106} 48.305 31.766 25.801
{ca leu i 107} 46.103 33.645 23.296
{ca pro i 108} 46.742 37.349 23.748
{ca thr i 109} 45.667 37.494 20.039
{ca leu i 110} 42.14 36.343 20.625
{ca arg i 111} 39.851 39.344 20.337
{ca glu i 112} 36.389 37.794 19.783
{ca leu i 113} 34.726 34.867 21.64
{ca his i 114} 31.236 33.378 21.304
{ca leu i 115} 30.131 30.795 23.852
{ca ser i 116} 26.398 31.197 23.515
{ca asp i 117} 23.826 28.431 23.776
{ca asn i 118} 26.118 26.415 25.94
{ca pro i 119} 24.959 25.341 29.406
{ca leu i 120} 27.962 26.854 31.124
{ca gly i 121} 25.889 27.579 34.184
{ca asp i 122} 27.461 30.031 36.598
{ca ala i 123} 30.187 27.447 37.183
{ca gly i 124} 31.247 27.783 33.542
{ca leu i 125} 31.146 31.542 33.514
{ca arg i 126} 33.242 31.527 36.674
{ca leu i 127} 36.163 29.655 35.154
{ca leu i 128} 35.642 31.808 32.025
{ca cys i 129} 36.344 34.926 34.105
{ca glu i 130} 39.669 33.579 35.52
{ca gly i 131} 41.055 33.84 32.028
{ca leu i 132} 39.37 37.167 31.257
{ca leu i 133} 41.403 38.709 34.065
{ca asp i 134} 44.977 37.702 33.213
{ca pro i 135} 46.867 40.729 31.789
{ca gln i 136} 47.658 38.385 28.863
{ca cys i 137} 43.969 38.291 27.816
{ca his i 138} 42.537 41.301 25.992
{ca leu i 139} 39.094 40.331 24.536
{ca glu i 140} 36.921 42.982 22.86
{ca lys i 141} 33.691 41.238 22.022
{ca leu i 142} 32.158 38.696 24.33
{ca gln i 143} 28.958 36.886 23.668
{ca leu i 144} 27.237 34.713 26.368
{ca glu i 145} 23.577 34.341 25.331
{ca tyr i 146} 21.354 31.375 26.312
{ca cys i 147} 24.028 30.143 28.814
{ca arg i 148} 21.886 29.207 31.827
{ca leu i 149} 23.598 31.979 33.694
{ca thr i 150} 21.788 33.035 36.752
{ca ala i 151} 22.665 36.17 38.715
{ca ala i 152} 25.551 34.377 40.428
{ca ser i 153} 27.503 34.948 37.274
{ca cys i 154} 27.265 38.744 37.73
{ca glu i 155} 29.825 39.445 40.459
{ca pro i 156} 32.725 37.638 38.661
{ca leu i 157} 31.846 39.457 35.483
{ca ala i 158} 31.456 42.756 37.3
{ca ser i 159} 34.929 41.79 38.42
{ca val i 160} 36.256 41.099 34.905
{ca leu i 161} 34.877 44.516 33.976
{ca arg i 162} 36.396 46.67 36.705
{ca ala i 163} 39.793 45.257 35.551
{ca thr i 164} 39.376 45.486 31.748
{ca arg i 165} 39.574 48.43 29.377
{ca ala i 166} 39.576 46.35 26.205
{ca leu i 167} 35.949 45.15 25.766
{ca lys i 168} 33.904 46.893 23.063
{ca glu i 169} 30.985 44.495 22.841
{ca leu i 170} 29.121 42.581 25.525
{ca thr i 171} 26.047 40.464 24.894
{ca val i 172} 24.586 38.453 27.782
{ca ser i 173} 21.015 38.204 26.451
{ca asn i 174} 18.675 35.347 27.4
{ca asn i 175} 20.004 34.509 30.83
{ca asp i 176} 17.777 34.875 33.889
{ca ile i 177} 19.973 37.208 35.9
{ca gly i 178} 17.143 39.439 37.284
{ca glu i 179} 17.164 42.89 38.92
{ca ala i 180} 19.807 42.124 41.538
{ca gly i 181} 22.414 40.63 39.244
{ca ala i 182} 22.147 43.361 36.601
{ca arg i 183} 22.648 45.89 39.379
{ca val i 184} 25.809 44.044 40.455
{ca leu i 185} 26.675 44.207 36.785
{ca gly i 186} 25.469 47.768 36.163
{ca gln i 187} 27.636 48.75 39.113
{ca gly i 188} 30.731 47.043 37.772
{ca leu i 189} 30.209 48.564 34.359
{ca ala i 190} 30.223 51.971 36.039
{ca asp i 191} 33.651 51.497 37.657
{ca ser i 192} 35.117 50.295 34.294
{ca ala i 193} 37.762 51.789 31.974
{ca cys i 194} 36.411 50.417 28.741
{ca gln i 195} 34.448 52.199 26.078
{ca ser i 251}P 25.814 59.936 24.316 {ca arg i 252} 25.798 59.116 20.563
{ca leu i 253} 23.613 56.01 20.704
{ca lys i 254} 22.859 55.077 17.116
{ca thr i 255} 20.765 52.005 17.657
{ca leu i 256} 18.229 51.602 20.482
{ca trp i 257} 16.302 48.329 20.579
{ca leu i 258} 13.234 48.44 22.868
{ca trp i 259} 10.827 45.787 21.675
{ca glu i 260} 8.405 44.042 24.069
{ca cys i 261} 9.342 46.275 27.026
{ca asp i 262} 5.84 47.202 28.294
{ca ile i 263} 5.725 50.711 26.893
{ca thr i 264} 2.376 52.322 26.033
{ca ala i 265} 1.467 55.87 24.899
{ca ser i 266} 2.96 57.436 28.08
{ca gly i 267} 6.477 56.202 27.402
{ca cys i 268} 6.655 57.526 23.818
{ca arg i 269} 5.974 61.028 25.131
{ca asp i 270} 9.198 60.609 27.119
{ca leu i 271} 10.977 59.216 24.021
{ca cys i 272} 9.83 61.877 21.605
{ca arg i 273} 11.653 64.616 23.525
{ca val i 274} 14.729 62.581 22.609
{ca leu i 275} 14.083 62.252 18.872
{ca gln i 276} 13.533 65.983 18.835
{ca ala i 277} 16.742 66.482 20.797
{ca lys i 278} 18.983 63.883 19.32
{ca glu i 279} 20.202 64.179 15.782
{ca thr i 280} 22.357 61.131 16.494
{ca leu i 281} 19.626 58.556 17.005
{ca lys i 282} 19.205 56.604 13.786
{ca glu i 283} 17.63 53.099 14.198
{ca leu i 284} 14.955 52.23 16.797
{ca ser i 285} 12.727 49.15 17.386
{ca leu i 286} 9.442 49.322 19.396
{ca ala i 287} 7.805 46.111 18.131
{ca gly i 288} 5.453 44.29 20.486
{ca asn i 289} 4.789 47.343 22.655
{ca lys i 290} 1.098 48.303 22.837
{ca leu i 291} 1.526 51.917 21.655
{ca gly i 292} -1.828 51.995 19.922
{ca asp i 293} -2.905 54.689 17.465
{ca glu i 294} -2.168 57.44 20.005
{ca gly i 295} 1.367 56.145 20.532
{ca ala i 296} 1.476 56.502 16.758
{ca arg i 297} 0.014 60.079 16.632
{ca leu i 298} 2.776 60.953 19.074
{ca leu i 299} 5.846 59.653 17.297
{ca cys i 300} 4.754 61.366 14.128
{ca glu i 301} 4.882 64.824 15.669
{ca ser i 302} 8.64 64.485 16.261
{ca leu i 303} 9.458 62.966 12.903
{ca leu i 304} 8.236 66.362 11.596
{ca gln i 305} 10.584 68.424 13.807
{ca pro i 306} 13.259 68.62 11.044
{ca gly i 307} 15.959 68.371 13.698
{ca cys i 308} 14.884 64.727 14.055
{ca gln i 309} 17.075 62.656 11.736
{ca leu i 310} 15.924 59.135 12.476
{ca glu i 311} 16.218 56.722 9.515
{ca ser i 312} 14.886 53.244 10.456
{ca leu i 313} 11.683 52.926 12.614
{ca trp i 314} 10.103 49.488 13.573
{ca val i 315} 6.518 49.203 14.97
{ca lys i 316} 5.819 45.591 14.117
{ca ser i 317} 2.879 44.507 16.231
{ca cys i 318} 2.206 47.752 18.189
{ca ser i 319} -1.579 47.69 18.423
{ca leu i 320} -2.114 50.126 15.549
{ca thr i 321} -5.198 50.231 13.371
{ca ala i 322} -6.421 52.274 10.425
{ca ala i 323} -6.861 55.305 12.679
{ca cys i 324} -3.1 56.031 12.71
{ca cys i 325} -2.598 55.97 8.915
{ca gln i 326} -4.017 59.413 8.506
{ca his i 327} -1.126 60.563 10.686
{ca val i 328} 1.38 58.025 9.489
{ca ser i 329} 0.807 59.24 5.927
{ca leu i 330} 0.981 62.958 6.632
{ca met i 331} 4.354 62.435 8.236
{ca leu i 332} 5.543 60.399 5.261
{ca thr i 333} 4.941 63.172 2.786
{ca gln i 334} 6.801 65.912 4.651
{ca asn i 335} 9.604 63.951 6.383
{ca lys i 336} 12.968 64.042 4.624
{ca his i 337} 14.985 61.626 6.848
{ca leu i 338} 13.024 58.371 7.446
{ca leu i 339} 13.857 55.48 5.081
{ca glu i 340} 12.571 52.266 6.543
{ca leu i 341} 9.165 51.46 8.086
{ca gln i 342} 8.082 48.206 9.638
{ca leu i 343} 4.342 48.354 10.113
{ca ser i 344} 3.867 44.627 9.982
{ca ser i 345} 1.371 42.644 11.997
{ca asn i 346} -0.731 45.671 12.63
{ca lys i 347} -4.398 45.576 11.652
{ca leu i 348} -4.227 48.452 9.164
{ca gly i 349} -6.524 46.718 6.668
{ca asp i 350} -7.208 47.775 3.13
{ca ser i 351} -8.247 51.285 4.153
{ca gly i 352} -5.044 52.021 6.018
{ca ile i 353} -2.882 50.862 3.176
{ca gln i 354} -4.504 53.31 0.794
{ca glu i 355} -3.822 56.541 2.692
{ca leu i 356} -0.248 55.343 2.748
{ca cys i 357} -0.322 54.721 -1.027
{ca gln i 358} -1.677 58.214 -1.671
{ca ala i 359} 0.673 59.886 0.738
{ca leu i 360} 3.63 57.995 -0.609
{ca ser i 361} 2.618 58.435 -4.216
{ca gln i 362} 3.017 62.211 -3.862
{ca pro i 363} 6.124 63.885 -5.395
{ca gly i 364} 9.408 63.907 -3.504
{ca thr i 365} 8.617 61.057 -1.087
{ca thr i 366} 11.676 59.423 0.456
{ca leu i 367} 10.666 56.219 2.24
{ca arg i 368} 12.656 53.495 0.563
{ca val i 369} 11.282 50.554 2.535
{ca leu i 370} 7.723 49.877 3.692
{ca cys i 371} 6.915 46.59 5.244
{ca leu i 372} 3.213 46.059 5.339
{ca gly i 373} 3.818 42.52 6.285
{ca asp i 374} 0.721 40.925 7.872
{ca cys i 375} -1.587 43.912 7.959
{ca glu i 376} -4.812 42.383 6.663
{ca val i 377} -4.425 43.547 3.043
{ca thr i 378} -6.626 41.78 0.401
{ca asn i 379} -6.797 41.446 -3.368
{ca ser i 380} -8.673 44.727 -3.342
{ca gly i 381} -5.774 46.421 -1.517
{ca cys i 382} -3.176 45.506 -4.081
{ca ser i 383} -5.178 47.867 -6.3
{ca ser i 384} -3.988 50.837 -4.204
{ca leu i 385} -0.56 49.404 -3.953
{ca ala i 386} -0.731 49.07 -7.755
{ca ser i 387} -1.433 52.789 -8.416
{ca leu i 388} 1.166 53.451 -5.73
{ca leu i 389} 3.885 51.465 -7.528
{ca leu i 390} 3.303 53.534 -10.67
{ca ala i 391} 3.409 57.039 -9.141
{ca asn i 392} 6.001 56.685 -6.303
{ca arg i 393} 9.65 56.927 -7.342
{ca ser i 394} 11.362 56.454 -3.911
{ca leu i 395} 10.422 52.89 -2.929
{ca arg i 396} 13.109 50.201 -3.315
{ca glu i 397} 11.451 47.468 -1.219
{ca leu i 398} 7.827 46.619 -0.345
{ca asp i 399} 7.228 43.716 1.983
{ca leu i 400} 3.651 42.371 1.881
{ca ser i 401} 4.162 38.774 3.014
{ca asn i 402} 1.454 37.207 5.187
{ca asn i 403} -1.582 39.028 3.862
{ca cys i 404} -4.865 37.89 2.283
{ca val i 405} -3.493 38.387 -1.216
{ca gly i 406} -4.098 35.891 -4.057
{ca asp i 407} -3.993 35.76 -7.829
{ca pro i 408} -5.848 38.991 -8.68
{ca gly i 409} -3.768 40.811 -6.122
{ca val i 410} -0.396 39.817 -7.568
{ca leu i 411} -1.659 40.308 -11.084
{ca gln i 412} -2.451 43.898 -10.188
{ca leu i 413} 0.99 44.241 -8.72
{ca leu i 414} 2.551 42.764 -11.853
{ca gly i 415} 0.584 45.141 -14.117
{ca ser i 416} 2.619 47.92 -12.436
{ca leu i 417} 5.935 46.073 -12.235
{ca glu i 418} 5.826 45.001 -15.894
{ca gln i 419} 5.498 48.673 -16.88
{ca pro i 420} 8.607 50.672 -17.844
{ca gly i 421} 8.997 53.401 -15.197
{ca cys i 422} 8.665 51.192 -12.031
{ca ala i 423} 11.512 51.912 -9.586
{ca leu i 424} 10.932 49.059 -7.116
{ca glu i 425} 13.706 46.391 -6.614
{ca gln i 426} 12.288 43.697 -4.281
{ca leu i 427} 8.69 42.845 -3.714
{ca val i 428} 8.552 40.599 -0.712
{ca leu i 429} 5.689 38.086 -0.723
{ca tyr i 430} 6.657 35.133 1.564
{ca asp i 431} 3.781 32.765 2.45
{ca thr i 432} 1.527 33.87 -0.384
{ca tyr i 433} -0.316 31.419 -2.659
{ca trp i 434} -0.705 31.705 -6.407
{ca thr i 435} -1.036 29.228 -9.253
{ca glu