@text
Immunogloblin Structure
*{Kin 1}* -  intact immunogloblin (IgG)
*{Kin 2}* -  ribbon drawing of an intact immunogloblin
  CONTACTS AT ANTIGEN-ANTIBODY INTERFACE, COMPARED WITH EVOLVED SUBUNIT INTERACTIONS
*{Kin 3}* -  contact dots for the antigen-antibody interface
*{Kin 4}* -  subunit interactions between the light and heavy chains

*{KINEMAGE 1}*

     This is an intact immunogloblin (IgG), with the heavychains in magenta and purple and the lightchains in sea and cyan.  The white is sugar and the green and yellow are disulfides.  The first VIEW shows a "T"-shaped immunogloblin.  The outside ends of the two prongs of the T are the active antibody sites, where the immunogloblin bonds to antigens to keep them from hurting the body.  To see another conformation of an intact IgG, click the "ANIMATE" button on the right.  This shows the extent of wildly differant conformations these things are capable of.  The second one looks more like the Y-diagrams people usually draw of IgGs.
     VIEW 2 Fc is a closeup of the interface between the two heavychains and the sugars (make sure 1igt is the active group by clicking the animate button).  VIEW2 is particularly fun to look at when the kaleidoscope option is active (to do this push "K" on the keyboard, and slowly move the molecule;  to turn it off push "K" again and click on the screen).
     If you go back to VIEW 1, you will notice that the overall molecule is not very symmetrical.  However, the pieces are each symmetrical - to see this emphasized turn on "axes" button.  The fact that the Fabs are at odd angles to the Fc is because the hinges between them are long and loose.  VIEW 3 is a close up of the hinge SSs. 
     VIEW 4 is of Fab, turn on the "CDRs" (in yellowtint) button.  To see the antigen binding site head on, choose VIEW 5 and make sure the "CDRs" button is still on.  To see how the antigen sites fit into the overall molecule go back to VIEW 1.

*{KINEMAGE 2}* Ribbon Immunogloblin 

    This is a ribbon drawing of an intact immunogloblin, with the heavychains in magenta and purple and the lightchains in sea and cyan.  The arrows are beta strands pointing along the N- to C-terminal direction of the chain.  The strands are organized into beta-sheets;  two beta-sheets make a beta-sandwich domain with a disulfide (shown in green) across the middle.  The white grape clusters are carbohydrates (linked sugars).
     VIEW2 Fc is a closeup of the interface between the two heavychains and the carbohydrates.  VIEW3 fab is a view of the antigen binding site of light chain A and heavy chain B.  Use the following hypertext button to turn on the arrow pointing to the antigen binding site:  *{Kin 2, view= 3, m= {arrow} on}*

  CONTACTS AT ANTIGEN-ANTIBODY INTERFACE, COMPARED WITH EVOLVED SUBUNIT INTERACTIONS
*{Kin 3}* -  contact dots for the antigen-antibody interface
*{Kin 4}* -  subunit interactions between the light and heavy chains

      *{KINEMAGE 3}* - Antigen-antibody contacts

     These two kinemages use a high resolution (1.5�) complex of mouse monoclonal antibody D1.3 with the protein lysozyme bound to it.  This is the most accurate structure available for such a complex, which is important because the atomic contacts are sensitive to very fine details of positioning.  To look at the detailed interactions between the antigen and the antibody we will use small-probe contact dots, which show patches of interaction only when two atoms are within half an �ngstrom of touching (Word et al. (1999) J. Mol. Biol. 285: 1711-1733).  The dots are calculated with the Reduce and Probe programs that run on Silicon Graphics workstations.
     Kinemage 1 starts up with an overview of the antigen, antibody, and their interface, which is shown with contact dots.  Most of the molecules are just C-alpha backbones except in the interface where there are side chains (pink for the lysozyme antigen and cyan for the antibody).  The water molecules are shown as little red balls.  Go up to the VIEWS pulldown menu and choose View2 interface.  The dots are color coded by how far apart the two atoms are: when they are further away the dots are blue, when they almost touch the dots are green, and when the atoms overlap a little bit the dots are yellow (still OK).  Bad clashes (overlaps more than 0.4�) are emphasized by red spikes.  The pale green pillow dots are favorable hydrogen bonds, where the electrostatic attraction between oxygens and nitrogens draw them closer together.
     The antigen-antibody interface needs to be good enough that only one protein will bind there, but unlike most protein interactions it has not been evolved over millions of years.  This interface is indeed fairly large with some nice interactions in it, but there are big gaps in between them with lots of waters and no direct contacts.  The rest of the views (3-8) are closeups of particular interactions.  

      *{KINEMAGE 4}* - Light-Heavy contacts

     For comparison, Kinemage 2 shows contact dots between the heavy and the light chains of the D1.3 antibody.  That interface is approximately the same overall size as the antigen-antibody one, but has no water molecules in it.  It twists to follow the beta sheets, and it has uniformly good, green, contacts all across it.  Choose view 2 to see a slice of the heavy-light interface.  This interface has good contacts and no big gaps with waters in them.  It has about 3000 contact dots while the antigen-antibody one had only about 2000.  In the closeup views (3-8) the hydrogen bonds are about equivalent between these two kinemages, but the heavy-light interface has much more extensive and well-fitted atom-atom contacts (mostly green and blue).
     Antibodies develop quite tight, specific binding in only a few cycles of selection and use a large contact area, but those contacts are not exceptionally well fitted.  This is unlike normal subunit contacts which have been evolving for millions of cycles, so they have had time to optimize their interface more thoroughly. 


@kinemage 1
@caption

This is the structure of an intact immunoglobulin.
 coordinates from file: 1igt 
deposited by:   L.J.HARRIS,S.B.LARSON,K.W.HASEL,A.MCPHERSON



@onewidth
@zoom 1.05
@zslab 200
@ztran 0
@center -2.411 -16.932 8.823
@matrix
-0.147857 -0.836351 0.527878 0.988593 -0.109506 0.103404 -0.028676 0.537146 0.843001
@2viewid {Fc }
@2zoom 2.22
@2zslab 160
@2ztran 0
@2center 16.182 -12.896 -24.888
@2matrix
-0.544263 -0.805696 -0.233732 -0.579599 0.159711 0.799097 -0.606501 0.570390 -0.553906
@3viewid {hinge SSs }
@3zoom 3.83
@3zslab 150
@3ztran 0
@3center 6.098 -11.396 14.511
@3matrix
-0.223359 -0.389714 0.893440 0.965881 0.034778 0.256639 -0.131087 0.920279 0.368649
@4viewid {Fab}
@4zoom 2.27
@4zslab 200
@4ztran 0
@4center 3.149 -55.332 45.374
@4matrix
-0.656322 0.461103 0.597181 -0.217658 -0.873576 0.435303 0.722403 0.155717 0.673710
@5viewid {binding site}
@5zoom 2.86
@5zslab 160
@5ztran 0
@5center 8.034 -77.133 54.930
@5matrix
0.391275 -0.841791 0.371875 0.572161 -0.093977 -0.814739 0.720788 0.531559 0.444869
@master {Calphas}
@master {CDRs}
@master {SS}
@master {Calphas2}
@master {axes}
@master {molec}
@group {1igt} animate
@subgroup {light ch 1} dominant
@vectorlist {Calphas} color= cyan master= {Calphas} master= {molec}
{ ca  asp a 1 }P 1.649 -84.304 45.569
{"}1.649 -84.304 45.569
{ ca  ile a 2 }-0.861 -83.420 48.270
{ ca  val a 3 }-2.524 -80.212 47.174
{ ca  leu a 4 }-3.913 -78.072 49.981
{ ca  thr a 5 }-7.110 -75.985 49.474
{ ca  gln a 6 }-7.379 -72.842 51.537
{ ca  ser a 7 }-10.771 -71.152 51.476
{ ca  pro a 8 }-12.014 -68.592 50.934
{ ca  ser a 9 }-9.551 -66.586 48.873
{ ca  ser a 10 }-10.179 -63.201 50.522
{ ca  leu a 11 }-12.273 -61.884 53.386
{ ca  ser a 12 }-13.426 -58.624 54.907
{ ca  ala a 13 }-14.773 -58.129 58.413
{ ca  ser a 14 }-15.005 -55.478 61.108
{ ca  leu a 15 }-12.507 -55.005 63.925
{ ca  gly a 16 }-13.047 -57.288 66.902
{ ca  asp a 17 }-14.821 -59.840 64.743
{ ca  thr a 18 }-13.921 -63.492 65.023
{ ca  ile a 19 }-13.192 -65.039 61.610
{ ca  thr a 20 }-12.414 -68.555 60.368
{ ca  ile a 21 }-10.068 -69.462 57.531
{ ca  thr a 22 }-9.855 -73.098 56.465
{ ca  cys a 23 }-7.613 -75.563 54.636
{ ca  his a 24 }-8.274 -78.981 53.190
{ ca  ala a 25 }-6.024 -81.655 51.933
{ ca  ser a 26 }-6.230 -84.300 49.274
{ ca  gln a 27 }-4.451 -87.020 51.273
{ ca  asn a 28 }-4.451 -87.331 55.094
{ ca  ile a 29 }-1.718 -85.208 56.766
{ ca  asn a 30 }-2.500 -86.160 60.343
{ ca  val a 31 }-1.722 -82.968 62.169
{ ca  trp a 32 }1.213 -81.650 60.179
{ ca  leu a 33 }-0.135 -78.217 59.268
{ ca  ser a 34 }1.445 -74.833 59.704
{ ca  trp a 35 }-0.072 -71.362 59.368
{ ca  tyr a 36 }1.855 -68.332 58.178
{ ca  gln a 37 }1.079 -64.632 58.173
{ ca  gln a 38 }2.409 -62.261 55.490
{ ca  lys a 39 }1.515 -58.601 56.044
{ ca  pro a 40 }1.833 -56.677 52.720
{ ca  gly a 41 }5.520 -56.148 52.146
{ ca  asn a 42 }7.106 -57.842 55.184
{ ca  ile a 43 }8.168 -61.533 55.184
{ ca  pro a 44 }5.997 -64.415 56.392
{ ca  lys a 45 }6.237 -65.274 60.045
{ ca  leu a 46 }5.271 -68.632 61.488
{ ca  leu a 47 }1.964 -68.470 63.372
{ ca  ile a 48 }1.050 -72.075 64.171
{ ca  tyr a 49 }2.580 -75.491 63.772
{ ca  lys a 50 }1.289 -78.969 64.554
{ ca  ala a 51 }-2.254 -77.805 63.774
{ ca  ser a 52 }-2.909 -76.063 67.082
{ ca  asn a 53 }0.527 -75.316 68.441
{ ca  leu a 54 }0.881 -71.566 68.651
{ ca  his a 55 }4.327 -70.167 67.887
{ ca  thr a 56 }6.147 -67.669 70.097
{ ca  gly a 57 }4.628 -64.189 70.074
{ ca  val a 58 }1.251 -65.172 68.620
{ ca  pro a 59 }-1.230 -63.422 70.950
{ ca  ser a 60 }-3.838 -65.857 72.307
{ ca  arg a 61 }-6.457 -64.507 69.860
{ ca  phe a 62 }-5.113 -66.827 67.128
{ ca  ser a 63 }-6.336 -70.398 67.276
{ ca  gly a 64 }-5.435 -73.312 65.057
{ ca  ser a 65 }-7.368 -76.543 64.983
{ ca  gly a 66 }-8.409 -79.551 62.972
{ ca  ser a 67 }-6.983 -82.970 62.053
{ ca  gly a 68 }-6.665 -85.331 59.112
{ ca  thr a 69 }-7.690 -83.326 56.060
{ ca  gly a 70 }-9.459 -80.204 57.232
{ ca  phe a 71 }-7.819 -77.599 59.431
{ ca  thr a 72 }-8.908 -74.168 60.408
{ ca  leu a 73 }-7.256 -71.036 61.719
{ ca  thr a 74 }-9.347 -68.670 63.787
{ ca  ile a 75 }-8.717 -65.095 64.816
{ ca  ser a 76 }-10.671 -63.417 67.597
{ ca  ser a 77 }-10.986 -59.648 68.084
{ ca  leu a 78 }-9.293 -58.689 64.832
{ ca  gln a 79 }-6.454 -56.380 65.773
{ ca  pro a 80 }-5.190 -54.122 62.900
{ ca  glu a 81 }-1.859 -55.996 62.704
{ ca  asp a 82 }-3.658 -59.092 61.444
{ ca  ile a 83 }-4.322 -57.709 57.982
{ ca  ala a 84 }-2.116 -59.949 55.904
{ ca  thr a 85 }-2.382 -63.019 53.771
{ ca  tyr a 86 }-2.506 -66.397 55.464
{ ca  tyr a 87 }-1.263 -69.638 54.024
{ ca  cys a 88 }-1.457 -73.133 55.437
{ ca  gln a 89 }1.086 -75.795 54.559
{ ca  gln a 90 }1.123 -79.528 55.060
{ ca  gly a 91 }4.275 -81.081 56.376
{ ca  gln a 92 }3.271 -84.746 56.236
{ ca  ser a 93 }5.232 -85.620 53.142
{ ca  tyr a 94 }7.374 -84.322 50.295
{ ca  pro a 95 }7.101 -82.069 48.509
{ ca  leu a 96 }6.085 -79.410 50.984
{ ca  thr a 97 }3.111 -77.615 49.547
{ ca  phe a 98 }1.210 -74.516 50.612
{ ca  gly a 99 }-2.437 -73.813 50.137
{ ca  gly a 100 }-2.702 -70.802 47.881
{ ca  gly a 101 }-3.558 -68.076 50.392
{ ca  thr a 102 }-6.404 -66.138 51.987
{ ca  lys a 103 }-6.097 -62.374 52.043
{ ca  leu a 104 }-7.571 -60.291 54.835
{ ca  glu a 105 }-9.449 -57.016 54.238
{ ca  ile a 106 }-10.801 -54.634 56.907
{ ca  lys a 107 }-14.375 -53.366 56.557
{ ca  arg a 108 }-14.979 -49.593 56.731
{ ca  ala a 109 }-17.746 -47.040 56.038
{ ca  asp a 110 }-18.118 -46.321 52.334
{ ca  ala a 111 }-16.145 -43.375 50.903
{ ca  ala a 112 }-16.350 -41.262 47.783
{ ca  pro a 113 }-13.427 -41.507 45.331
{ ca  thr a 114 }-11.651 -38.256 44.560
{ ca  val a 115 }-11.079 -38.376 40.806
{ ca  ser a 116 }-8.678 -36.340 38.752
{ ca  ile a 117 }-7.918 -36.283 35.071
{ ca  phe a 118 }-4.555 -35.423 33.599
{ ca  pro a 119 }-3.928 -34.405 29.959
{ ca  pro a 120 }-0.685 -35.701 28.433
{ ca  ser a 121 }2.459 -33.775 29.240
{ ca  ser a 122 }3.901 -31.463 26.604
{ ca  glu a 123 }7.106 -33.360 27.258
{ ca  gln a 124 }5.390 -36.597 26.211
{ ca  leu a 125 }3.691 -35.122 23.157
{ ca  thr a 126 }7.082 -34.016 21.844
{ ca  ser a 127 }8.048 -37.686 22.199
{ ca  gly a 128 }5.195 -38.933 20.017
{ ca  gly a 129 }2.653 -40.511 22.335
{ ca  ala a 130 }-0.213 -39.425 24.539
{ ca  ser a 131 }-1.284 -40.741 27.887
{ ca  val a 132 }-4.327 -39.352 29.636
{ ca  val a 133 }-4.278 -40.415 33.263
{ ca  cys a 134 }-7.100 -40.484 35.692
{ ca  phe a 135 }-6.685 -40.892 39.461
{ ca  leu a 136 }-9.567 -42.366 41.466
{ ca  asn a 137 }-8.114 -41.859 44.947
{ ca  asn a 138 }-9.201 -42.806 48.490
{ ca  phe a 139 }-12.368 -44.868 48.283
{ ca  tyr a 140 }-14.176 -47.954 49.555
{ ca  pro a 141 }-15.380 -50.568 48.638
{ ca  lys a 142 }-12.845 -51.773 46.083
{ ca  asp a 143 }-15.637 -52.437 43.603
{ ca  ile a 144 }-15.610 -49.581 41.108
{ ca  asn a 145 }-15.689 -49.348 37.352
{ ca  val a 146 }-14.173 -46.657 35.256
{ ca  lys a 147 }-14.588 -46.107 31.545
{ ca  trp a 148 }-12.983 -43.585 29.228
{ ca  lys a 149 }-14.946 -41.593 26.663
{ ca  ile a 150 }-13.403 -39.632 23.802
{ ca  asp a 151 }-15.651 -37.237 21.846
{ ca  gly a 152 }-19.220 -37.028 23.049
{ ca  ser a 153 }-19.485 -40.321 24.942
{ ca  glu a 154 }-17.620 -42.976 22.921
{ ca  arg a 155 }-16.068 -45.733 25.075
{ ca  gln a 156 }-12.587 -47.222 24.493
{ ca  asn a 157 }-10.798 -50.505 25.402
{ ca  gly a 158 }-7.025 -49.866 25.211
{ ca  val a 159 }-6.554 -48.938 28.891
{ ca  leu a 160 }-4.122 -49.873 31.688
{ ca  asn a 161 }-5.581 -50.031 35.196
{ ca  ser a 162 }-3.972 -50.450 38.584
{ ca  trp a 163 }-5.322 -50.447 42.159
{ ca  thr a 164 }-3.396 -50.444 45.406
{ ca  asp a 165 }-3.821 -52.697 48.445
{ ca  gln a 166 }-6.077 -51.460 51.228
{ ca  asp a 167 }-4.243 -48.497 52.740
{ ca  ser a 168 }-3.060 -48.910 56.313
{ ca  lys a 169 }-4.356 -45.632 57.787
{ ca  asp a 170 }-7.420 -44.716 55.688
{ ca  ser a 171 }-8.427 -48.340 55.056
{ ca  thr a 172 }-9.281 -47.125 51.544
{ ca  tyr a 173 }-8.140 -48.029 48.034
{ ca  ser a 174 }-6.865 -46.047 45.088
{ ca  met a 175 }-6.659 -46.576 41.347
{ ca  ser a 176 }-4.892 -45.126 38.361
{ ca  ser a 177 }-6.483 -45.678 34.980
{ ca  thr a 178 }-4.423 -44.633 31.987
{ ca  leu a 179 }-5.486 -44.302 28.348
{ ca  thr a 180 }-2.527 -44.365 25.943
{ ca  leu a 181 }-2.828 -43.013 22.370
{ ca  thr a 182 }-0.576 -41.760 19.607
{ ca  lys a 183 }-0.048 -37.980 19.331
{ ca  asp a 184 }-1.904 -37.806 16.049
{ ca  glu a 185 }-4.785 -40.002 17.273
{ ca  tyr a 186 }-4.929 -37.895 20.421
{ ca  glu a 187 }-5.049 -34.813 18.189
{ ca  arg a 188 }-7.994 -35.977 16.065
{ ca  his a 189 }-10.402 -35.433 18.959
{ ca  asn a 190 }-11.439 -32.696 21.339
{ ca  ser a 191 }-13.040 -34.014 24.551
{ ca  tyr a 192 }-11.812 -36.694 26.992
{ ca  thr a 193 }-13.803 -38.098 29.884
{ ca  cys a 194 }-13.023 -40.391 32.761
{ ca  glu a 195 }-16.314 -41.838 34.025
{ ca  ala a 196 }-16.522 -43.582 37.373
{ ca  thr a 197 }-19.332 -45.733 38.744
{ ca  his a 198 }-19.400 -46.567 42.460
{ ca  lys a 199 }-21.749 -47.593 45.289
{ ca  thr a 200 }-21.302 -44.232 46.998
{ ca  ser a 201 }-23.199 -42.337 44.297
{ ca  thr a 202 }-26.122 -43.111 42.028
{ ca  ser a 203 }-24.987 -40.692 39.339
{ ca  pro a 204 }-21.559 -41.602 37.832
{ ca  ile a 205 }-18.729 -39.360 39.003
{ ca  val a 206 }-17.333 -37.673 35.899
{ ca  lys a 207 }-14.347 -35.424 35.236
{ ca  ser a 208 }-13.732 -34.186 31.707
{ ca  phe a 209 }-11.306 -31.923 29.896
{ ca  asn a 210 }-11.272 -30.358 26.402
{ ca  arg a 211 }-7.992 -30.284 24.407
{ ca  asn a 212 }-9.152 -26.915 23.014
{ ca  glu a 213 }-6.822 -25.030 25.385
{ ca  cys a 214 }-4.047 -27.327 26.666
@vectorlist {CDRs} color= yellowtint master= {CDRs}  master= {molec}
{ ca  ile a 29 }P -1.718 -85.208 56.766
{ ca  asn a 30 }-2.500 -86.160 60.343
{ ca  val a 31 }-1.722 -82.968 62.169
{ ca  trp a 32 }1.213 -81.650 60.179
{ ca  leu a 33 }-0.135 -78.217 59.268
{ ca  tyr a 49 }P 2.580 -75.491 63.772
{ ca  lys a 50 }1.289 -78.969 64.554
{ ca  ala a 51 }-2.254 -77.805 63.774
{ ca  ser a 52 }-2.909 -76.063 67.082
{ ca  asn a 53 }0.527 -75.316 68.441
{ ca  gly a 91 }P 4.275 -81.081 56.376
{ ca  gln a 92 }3.271 -84.746 56.236
{ ca  ser a 93 }5.232 -85.620 53.142
{ ca  tyr a 94 }7.374 -84.322 50.295
{ ca  pro a 95 }7.101 -82.069 48.509
@vectorlist {SS} color= green master= {SS}  master= {molec}
{ ca  cys a 23 }P -7.613 -75.563 54.636
{ cb  cys a 23 }-6.146 -75.500 55.049
{ sg  cys a 23 }-5.203 -74.368 53.988
{ ca  cys a 88 }P -1.457 -73.133 55.437
{ cb  cys a 88 }-2.753 -73.898 55.597
{ sg  cys a 88 }-3.253 -74.904 54.165
{ ca  cys a 134 }P -7.100 -40.484 35.692
{ cb  cys a 134 }-8.397 -40.915 35.051
{ sg  cys a 134 }-9.810 -40.082 35.808
{ ca  cys a 194 }P -13.023 -40.391 32.761
{ cb  cys a 194 }-11.843 -39.952 33.616
{ sg  cys a 194 }-11.369 -41.043 34.965
{ ca  cys a 214 }P -4.047 -27.327 26.666
{ cb  cys a 214 }-3.829 -27.305 28.199
{ sg  cys a 214 }-2.887 -25.901 28.930
{ sg  cys a 23 }P -5.203 -74.368 53.988
{ sg  cys a 88 }-3.253 -74.904 54.165
{ sg  cys a 134 }P -9.810 -40.082 35.808
{ sg  cys a 194 }-11.369 -41.043 34.965
@subgroup {heavy ch 1} dominant
@vectorlist {Calphas} color= purple master= {Calphas}  master= {molec}
{ ca  glu b 1 }P 19.722 -62.606 66.868
{"}19.722 -62.606 66.868
{ ca  val b 2 }18.642 -65.363 64.490
{ ca  lys b 3 }18.564 -63.689 61.104
{ ca  leu b 4 }18.790 -65.071 57.586
{ ca  gln b 5 }20.278 -62.896 54.879
{ ca  glu b 6 }20.130 -64.599 51.511
{ ca  ser b 7 }21.503 -62.401 48.752
{ ca  gly b 8 }22.762 -62.492 45.187
{ ca  gly b 9 }20.685 -62.963 42.067
{ ca  gly b 10 }19.510 -60.095 39.915
{ ca  leu b 11 }18.284 -60.611 36.358
{ ca  val b 12 }19.253 -63.306 33.899
{ ca  gln b 13 }17.882 -64.483 30.575
{ ca  pro b 14 }16.443 -67.976 30.044
{ ca  gly b 15 }18.761 -71.003 29.938
{ ca  gly b 16 }21.168 -69.111 32.169
{ ca  ser b 17 }22.421 -69.887 35.660
{ ca  leu b 18 }22.664 -68.058 39.015
{ ca  lys b 19 }24.096 -68.911 42.460
{ ca  leu b 20 }21.992 -68.006 45.493
{ ca  ser b 21 }23.723 -67.534 48.860
{ ca  cys b 22 }21.959 -67.495 52.236
{ ca  ala b 23 }23.724 -66.083 55.259
{ ca  thr b 24 }22.721 -67.519 58.640
{ ca  ser b 25 }23.519 -65.920 62.001
{ ca  gly b 26 }22.359 -66.387 65.585
{ ca  phe b 27 }22.222 -70.177 65.935
{ ca  thr b 28 }24.207 -73.395 65.702
{ ca  phe b 29 }23.537 -73.464 61.948
{ ca  ser b 30 }25.326 -76.818 61.809
{ ca  asp b 31 }22.392 -78.513 63.589
{ ca  tyr b 32 }19.368 -77.530 61.443
{ ca  tyr b 33 }17.823 -78.634 58.130
{ ca  met b 34 }17.339 -75.827 55.626
{ ca  tyr b 35 }14.708 -74.972 53.041
{ ca  trp b 36 }14.650 -72.825 49.959
{ ca  val b 37 }11.210 -71.421 49.253
{ ca  arg b 38 }10.074 -69.234 46.364
{ ca  gln b 39 }7.041 -66.961 46.086
{ ca  thr b 40 }6.082 -65.995 42.498
{ ca  pro b 41 }4.922 -62.466 41.509
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@vectorlist {SS} color= green master= {SS}  master= {molec}
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@vectorlist {SS} color= green master= {SS}  master= {molec}
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{ c1  man d 5 }P 22.980 -6.842 -20.680
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{ c1  nag d 6 }P 26.076 -5.958 -21.307
{"}26.076 -5.958 -21.307
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{ c3  nag d 6 }28.210 -7.140 -21.075
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{ c5  nag d 6 }27.965 -4.627 -20.672
{ c6  nag d 6 }28.560 -3.247 -20.934
{ c7  nag d 6 }P 25.589 -8.646 -23.082
{ c8  nag d 6 }24.899 -9.999 -23.046
{ c2  nag d 6 }P 26.955 -7.030 -21.931
{ n2  nag d 6 }26.266 -8.304 -21.991
{ c3  nag d 6 }P 28.210 -7.140 -21.075
{ o3  nag d 6 }29.058 -8.144 -21.613
{ c4  nag d 6 }P 28.933 -5.782 -21.044
{ o4  nag d 6 }30.002 -5.805 -20.067
{ c1  nag d 6 }P 26.076 -5.958 -21.307
{ o5  nag d 6 }26.731 -4.694 -21.431
{ c6  nag d 6 }P 28.560 -3.247 -20.934
{ o6  nag d 6 }29.662 -2.980 -20.078
{ c7  nag d 6 }P 25.589 -8.646 -23.082
{ o7  nag d 6 }25.522 -7.923 -24.076
{ c7  nag d 6 }P 25.589 -8.646 -23.082
{ n2  nag d 6 }26.266 -8.304 -21.991
{ c5  nag d 6 }P 27.965 -4.627 -20.672
{ o5  nag d 6 }26.731 -4.694 -21.431
{ c1  nag d 6 }P 26.076 -5.958 -21.307
{ o2  man d 5 }24.840 -5.884 -21.951
{ c1  gal d 7 }P 30.925 -6.846 -20.032
{"}30.925 -6.846 -20.032
{ c2  gal d 7 }31.908 -6.729 -21.213
{ c3  gal d 7 }33.005 -7.790 -21.121
{ c4  gal d 7 }33.555 -7.890 -19.697
{ c5  gal d 7 }33.045 -6.735 -18.832
{ c6  gal d 7 }33.489 -5.335 -19.267
{ c2  gal d 7 }P 31.908 -6.729 -21.213
{ o2  gal d 7 }31.219 -6.886 -22.444
{ c3  gal d 7 }P 33.005 -7.790 -21.121
{ o3  gal d 7 }34.059 -7.468 -22.021
{ c4  gal d 7 }P 33.555 -7.890 -19.697
{ o4  gal d 7 }34.977 -7.880 -19.731
{ c1  gal d 7 }P 30.925 -6.846 -20.032
{ o5  gal d 7 }31.599 -6.756 -18.760
{ c6  gal d 7 }P 33.489 -5.335 -19.267
{ o6  gal d 7 }32.385 -4.451 -19.429
{ c5  gal d 7 }P 33.045 -6.735 -18.832
{ o5  gal d 7 }31.599 -6.756 -18.760
{ c1  gal d 7 }P 30.925 -6.846 -20.032
{ o4  nag d 6 }30.002 -5.805 -20.067
{ c1  man d 8 }P 18.070 -10.445 -15.194
{"}18.070 -10.445 -15.194
{ c2  man d 8 }17.746 -11.944 -15.167
{ c3  man d 8 }16.325 -12.169 -15.659
{ c4  man d 8 }15.360 -11.346 -14.803
{ c5  man d 8 }15.773 -9.866 -14.805
{ c6  man d 8 }14.926 -9.000 -13.882
{ c2  man d 8 }P 17.746 -11.944 -15.167
{ o2  man d 8 }17.853 -12.444 -13.819
{ c3  man d 8 }P 16.325 -12.169 -15.659
{ o3  man d 8 }16.002 -13.548 -15.548
{ c4  man d 8 }P 15.360 -11.346 -14.803
{ o4  man d 8 }14.040 -11.489 -15.310
{ c1  man d 8 }P 18.070 -10.445 -15.194
{ o5  man d 8 }17.147 -9.736 -14.379
{ c6  man d 8 }P 14.926 -9.000 -13.882
{ o6  man d 8 }15.194 -7.614 -14.075
{ c5  man d 8 }P 15.773 -9.866 -14.805
{ o5  man d 8 }17.147 -9.736 -14.379
{ c1  man d 8 }P 18.070 -10.445 -15.194
{ o3  man d 4 }18.042 -9.991 -16.519
{ c1  nag d 9 }P 19.111 -12.832 -13.389
{"}19.111 -12.832 -13.389
{ c2  nag d 9 }19.154 -12.814 -11.862
{ c3  nag d 9 }20.553 -13.241 -11.397
{ c4  nag d 9 }20.853 -14.634 -11.965
{ c5  nag d 9 }20.681 -14.634 -13.494
{ c6  nag d 9 }20.841 -16.007 -14.118
{ c7  nag d 9 }P 19.308 -10.383 -11.807
{ c8  nag d 9 }18.797 -9.101 -11.171
{ c2  nag d 9 }P 19.154 -12.814 -11.862
{ n2  nag d 9 }18.774 -11.510 -11.338
{ c3  nag d 9 }P 20.553 -13.241 -11.397
{ o3  nag d 9 }20.612 -13.276 -9.976
{ c4  nag d 9 }P 20.853 -14.634 -11.965
{ o4  nag d 9 }22.180 -15.018 -11.623
{ c1  nag d 9 }P 19.111 -12.832 -13.389
{ o5  nag d 9 }19.361 -14.161 -13.861
{ c6  nag d 9 }P 20.841 -16.007 -14.118
{ o6  nag d 9 }20.457 -15.985 -15.487
{ c7  nag d 9 }P 19.308 -10.383 -11.807
{ o7  nag d 9 }20.184 -10.359 -12.673
{ c7  nag d 9 }P 19.308 -10.383 -11.807
{ n2  nag d 9 }18.774 -11.510 -11.338
{ c5  nag d 9 }P 20.681 -14.634 -13.494
{ o5  nag d 9 }19.361 -14.161 -13.861
{ c1  nag d 9 }P 19.111 -12.832 -13.389
{ o2  man d 8 }17.853 -12.444 -13.819
@vectorlist {Drawn} color= pinktint master= {axes} 
{T Fab1 2fold}P 11.779 -84.016 61.139
{"} pinktint 3.149 -55.332 45.374
{"} pinktint -5.481 -26.648 29.608
{T Fab1 2fold}P 11.779 -84.016 61.139
{->}8.482 -80.347 60.323
{T Fab1 2fold}P 11.779 -84.016 61.139
{->}9.658 -81.674 57.264
{T Fab1 2fold}P 11.779 -84.016 61.139
{->}12.868 -80.347 57.922
{T Fab1 2fold}P 11.779 -84.016 61.139
{->}11.692 -79.019 60.981


{T Fab2 2fold}P -11.599 -1.881 23.577
{"} pinktint -25.209 23.794 8.276
{"} pinktint -38.819 49.468 -7.025
{T Fab2 2fold}P -38.819 49.468 -7.025
{->}-34.816 47.254 -5.008
{T Fab2 2fold}P -38.819 49.468 -7.025
{->}-36.479 45.054 -7.220
{T Fab2 2fold}P -38.819 49.468 -7.025
{->}-39.233 44.912 -5.008
{T Fab2 2fold}P -38.819 49.468 -7.025
{->}-37.570 47.112 -2.795

{T Fc 2fold}P 36.360 -40.864 -44.261
{"} pinktint 20.905 -21.453 -26.260
{"} pinktint 5.450 -2.043 -8.260
{T Fc 2fold}P 5.450 -2.043 -8.260
{->}7.633 -3.085 -12.636
{T Fc 2fold}P 5.450 -2.043 -8.260
{->}5.474 -5.709 -11.660
{T Fc 2fold}P 5.450 -2.043 -8.260
{->}7.633 -6.485 -8.970
{T Fc 2fold}P 5.450 -2.043 -8.260
{->}9.792 -3.861 -9.946

@vectorlist {Drawn} color= green master= {SS}  master= {molec}
{ sg  cys d 128 }P -12.083 -3.008 22.678
{ sg  cys c 214 }-11.402 -1.099 22.621
{ sg  cys b 128 }P -4.245 -24.811 29.988
{ sg  cys a 214 }-2.887 -25.901 28.930
{ sg  cys b 237 }P 8.478 -11.204 16.647
{ sg  cys d 237 }7.042 -10.048 17.515
{ sg  cys b 240 }P 13.548 -10.062 12.027
{ sg  cys d 240 }12.576 -9.635 13.763
{ sg  cys b 242 }P 11.387 -4.407 7.059
{ sg  cys d 242 }12.785 -3.519 8.245





@group {1igy} animate
@subgroup {light ch 1} dominant
@vectorlist {Calphas} color= sky master= {Calphas2}  master= {molec}
{ ca  lys a 2 }P -25.305 40.549 26.001
{"}-25.305 40.549 26.001
{ ca  cys a 3 }-23.445 37.593 27.429
{ ca  ala a 4 }-24.669 34.100 28.196
{ ca  his a 5 }-22.859 31.042 29.676
{ ca  thr a 6 }-23.759 27.326 29.394
{ ca  val a 7 }-23.398 25.035 32.430
{ ca  ser a 8 }-21.078 22.006 32.424
{ ca  lys a 9 }-18.649 22.315 29.506
{ ca  ser a 10 }-19.371 18.611 28.824
{ ca  met a 11 }-21.558 15.908 30.342
{ ca  ser a 12 }-21.094 12.140 30.245
{ ca  met a 13 }-24.457 10.372 30.640
{ ca  ser a 14 }-25.741 6.866 29.817
{ ca  val a 15 }-29.081 6.208 28.067
{ ca  gly a 16 }-32.222 6.777 30.101
{ ca  glu a 17 }-30.336 9.144 32.371
{ ca  arg a 18 }-32.149 12.396 33.073
{ ca  val a 19 }-29.623 15.054 32.044
{ ca  thr a 20 }-30.048 18.765 32.514
{ ca  leu a 21 }-27.922 21.779 31.694
{ ca  thr a 22 }-28.640 25.432 32.239
{ ca  cys a 23 }-27.564 28.698 30.695
{ ca  lys a 24 }-26.923 31.779 32.873
{ ca  ala a 25 }-27.121 35.212 31.216
{ ca  ser a 26 }-25.491 38.483 32.276
{ ca  glu a 27 }-28.715 40.530 32.306
{ ca  asn a 28 }-32.460 39.960 32.070
{ ca  val a 29 }-33.350 38.515 28.670
{ ca  val a 30 }-37.033 37.790 29.279
{ ca  thr a 31 }-37.322 34.291 27.758
{ ca  tyr a 32 }-35.513 35.070 24.454
{ ca  val a 33 }-33.112 32.174 24.303
{ ca  ser a 34 }-33.026 29.323 21.811
{ ca  trp a 35 }-31.106 26.063 22.321
{ ca  tyr a 36 }-29.473 24.652 19.245
{ ca  gln a 37 }-28.383 21.063 18.795
{ ca  gln a 38 }-25.153 20.666 16.896
{ ca  lys a 39 }-24.342 17.077 16.120
{ ca  pro a 40 }-20.749 16.400 15.000
{ ca  glu a 41 }-19.709 17.140 11.415
{ ca  gln a 42 }-23.038 18.950 10.786
{ ca  ser a 43 }-24.922 22.285 10.961
{ ca  pro a 44 }-26.775 23.277 14.153
{ ca  lys a 45 }-30.477 22.805 14.463
{ ca  leu a 46 }-32.979 24.927 16.270
{ ca  leu a 47 }-34.075 22.724 19.145
{ ca  ile a 48 }-36.323 24.942 21.310
{ ca  tyr a 49 }-37.268 28.632 21.166
{ ca  gly a 50 }-38.476 31.260 23.588
{ ca  ala a 51 }-38.927 29.794 27.039
{ ca  ser a 52 }-39.567 26.212 25.964
{ ca  asn a 53 }-42.028 25.498 23.120
{ ca  arg a 54 }-40.319 22.651 21.279
{ ca  tyr a 55 }-39.692 23.450 17.640
{ ca  thr a 56 }-41.474 21.221 15.140
{ ca  gly a 57 }-39.761 17.869 14.713
{ ca  val a 58 }-38.494 17.684 18.288
{ ca  pro a 59 }-38.823 14.828 20.907
{ ca  asp a 60 }-40.965 15.254 24.075
{ ca  arg a 61 }-37.936 14.199 26.142
{ ca  phe a 62 }-36.239 17.503 25.395
{ ca  thr a 63 }-37.474 20.343 27.617
{ ca  gly a 64 }-36.632 23.998 28.168
{ ca  ser a 65 }-37.156 26.302 31.137
{ ca  gly a 66 }-35.973 29.667 32.436
{ ca  ser a 67 }-36.814 33.341 32.778
{ ca  ala a 68 }-34.130 36.005 33.169
{ ca  thr a 69 }-30.629 35.061 34.293
{ ca  asp a 70 }-31.269 31.339 34.097
{ ca  phe a 71 }-32.415 28.953 31.383
{ ca  thr a 72 }-32.572 25.169 31.798
{ ca  leu a 73 }-32.957 22.431 29.220
{ ca  thr a 74 }-33.882 19.126 30.797
{ ca  ile a 75 }-33.822 15.930 28.761
{ ca  ser a 76 }-35.476 12.938 30.426
{ ca  ser a 77 }-33.453 10.109 28.874
{ ca  val a 78 }-30.426 10.341 26.628
{ ca  gln a 79 }-29.986 8.421 23.310
{ ca  ala a 80 }-27.897 7.961 20.185
{ ca  glu a 81 }-29.962 10.909 18.908
{ ca  asp a 82 }-28.599 12.920 21.833
{ ca  leu a 83 }-24.881 12.828 21.197
{ ca  ala a 84 }-23.875 16.389 20.316
{ ca  asp a 85 }-22.997 19.861 21.585
{ ca  tyr a 86 }-25.607 22.159 23.064
{ ca  his a 87 }-25.524 25.925 23.530
{ ca  cys a 88 }-28.107 28.603 24.258
{ ca  gly a 89 }-28.555 31.564 21.950
{ ca  gln a 90 }-29.232 35.015 23.375
{ ca  gly a 91 }-31.817 36.675 21.129
{ ca  tyr a 92 }-32.972 39.690 23.144
{ ca  ser a 93 }-30.743 42.413 21.662
{ ca  tyr a 94 }-27.811 42.759 19.273
{ ca  pro a 95 }-25.176 41.772 19.430
{ ca  tyr a 96 }-26.538 38.244 19.793
{ ca  thr a 97 }-24.376 35.893 21.838
{ ca  phe a 98 }-24.521 32.115 22.207
{ ca  gly a 99 }-23.454 30.105 25.206
{ ca  gly a 100 }-20.068 28.459 25.475
{ ca  gly a 101 }-21.616 25.177 24.424
{ ca  thr a 102 }-21.666 21.889 26.307
{ ca  lys a 103 }-20.574 18.532 24.888
{ ca  leu a 104 }-22.863 15.648 25.822
{ ca  glu a 105 }-20.653 12.538 25.771
{ ca  ile a 106 }-22.579 9.255 26.263
{ ca  lys a 107 }-21.472 6.522 28.744
{ ca  arg a 108 }-21.403 2.812 27.943
{ ca  ala a 109 }-19.292 0.965 30.539
{ ca  asp a 110 }-15.547 0.404 30.227
{ ca  ala a 111 }-13.777 -1.011 27.193
{ ca  ala a 112 }-9.997 -1.459 26.862
{ ca  pro a 113 }-7.975 -0.281 23.791
{ ca  thr a 114 }-6.489 -2.313 20.961
{ ca  val a 115 }-3.033 -1.032 20.224
{ ca  ser a 116 }-0.969 -1.752 17.161
{ ca  ile a 117 }2.515 -0.358 16.643
{ ca  phe a 118 }3.858 0.293 13.158
{ ca  pro a 119 }7.490 0.842 12.130
{ ca  pro a 120 }8.361 3.730 9.752
{ ca  ser a 121 }7.924 2.889 6.071
{ ca  ser a 122 }10.853 2.104 3.787
{ ca  glu a 123 }9.943 5.165 1.673
{ ca  gln a 124 }10.059 7.729 4.514
{ ca  leu a 125 }13.345 6.453 5.963
{ ca  thr a 126 }15.136 7.150 2.683
{ ca  ser a 127 }14.136 10.845 2.768
{ ca  gly a 128 }15.462 11.283 6.290
{ ca  gly a 129 }13.113 10.965 9.240
{ ca  ala a 130 }11.143 8.120 10.800
{ ca  ser a 131 }7.523 8.001 11.902
{ ca  val a 132 }6.667 5.334 14.394
{ ca  val a 133 }2.903 5.235 14.610
{ ca  cys a 134 }0.837 3.635 17.336
{ ca  phe a 135 }-2.923 3.205 16.930
{ ca  leu a 136 }-4.896 2.536 20.080
{ ca  asn a 137 }-8.317 1.939 18.627
{ ca  asn a 138 }-11.732 1.296 20.087
{ ca  phe a 139 }-11.685 2.133 23.800
{ ca  tyr a 140 }-13.674 3.876 26.507
{ ca  pro a 141 }-13.139 6.260 28.195
{ ca  lys a 142 }-10.694 8.758 26.687
{ ca  asp a 143 }-8.752 8.715 29.939
{ ca  ile a 144 }-5.492 7.059 28.838
{ ca  asn a 145 }-1.748 7.739 28.787
{ ca  val a 146 }0.595 6.927 25.918
{ ca  lys a 147 }4.244 6.312 26.697
{ ca  trp a 148 }6.840 5.630 24.073
{ ca  lys a 149 }10.301 4.151 24.666
{ ca  ile a 150 }13.093 4.980 22.184
{ ca  asp a 151 }14.785 1.665 22.947
{ ca  gly a 152 }15.328 1.056 26.646
{ ca  ser a 153 }12.876 3.247 28.589
{ ca  glu a 154 }12.289 6.868 27.519
{ ca  arg a 155 }9.425 9.034 26.272
{ ca  gln a 156 }11.044 11.909 24.314
{ ca  asn a 157 }9.209 14.684 22.473
{ ca  gly a 158 }7.948 14.687 18.904
{ ca  val a 159 }4.811 12.752 19.754
{ ca  leu a 160 }1.541 13.664 18.055
{ ca  asn a 161 }-1.565 12.501 19.912
{ ca  ser a 162 }-4.783 12.803 17.919
{ ca  trp a 163 }-8.009 11.471 19.408
{ ca  thr a 164 }-11.330 11.053 17.628
{ ca  asp a 165 }-14.906 11.882 18.601
{ ca  gln a 166 }-17.180 9.507 20.439
{ ca  asp a 167 }-18.307 7.106 17.713
{ ca  ser a 168 }-22.089 7.007 17.166
{ ca  lys a 169 }-22.845 3.261 17.292
{ ca  asp a 170 }-19.551 2.089 18.693
{ ca  ser a 171 }-19.388 4.877 21.295
{ ca  thr a 172 }-15.603 4.704 21.597
{ ca  tyr a 173 }-12.551 6.881 21.253
{ ca  ser a 174 }-9.743 5.529 19.130
{ ca  met a 175 }-6.803 7.861 19.565
{ ca  ser a 176 }-3.594 7.445 17.568
{ ca  ser a 177 }-0.094 8.623 18.659
{ ca  thr a 178 }2.615 9.017 16.053
{ ca  leu a 179 }6.236 9.767 16.891
{ ca  thr a 180 }8.674 11.447 14.554
{ ca  leu a 181 }12.443 11.625 14.848
{ ca  thr a 182 }15.854 11.435 13.151
{ ca  lys a 183 }16.502 8.722 10.576
{ ca  asp a 184 }19.748 7.398 12.026
{ ca  glu a 185 }18.820 8.300 15.636
{ ca  tyr a 186 }16.247 5.644 15.049
{ ca  glu a 187 }18.994 3.494 13.466
{ ca  arg a 188 }21.108 3.909 16.591
{ ca  his a 189 }18.350 2.144 18.548
{ ca  asn a 190 }16.618 -1.217 18.214
{ ca  ser a 191 }13.532 -2.124 20.262
{ ca  tyr a 192 }10.728 0.476 20.105
{ ca  thr a 193 }8.174 0.172 22.892
{ ca  cys a 194 }4.766 1.879 22.679
{ ca  glu a 195 }3.498 1.406 26.248
{ ca  ala a 196 }-0.007 2.527 27.190
{ ca  thr a 197 }-1.880 2.789 30.466
{ ca  his a 198 }-5.671 2.874 30.518
{ ca  lys a 199 }-8.026 2.175 33.452
{ ca  thr a 200 }-9.509 -1.163 32.319
{ ca  ser a 201 }-6.345 -3.209 32.740
{ ca  thr a 202 }-4.670 -2.418 36.062
{ ca  ser a 203 }-1.536 -3.471 34.225
{ ca  pro a 204 }-0.099 -1.565 31.220
{ ca  ile a 205 }-0.772 -2.569 27.647
{ ca  val a 206 }2.380 -2.788 25.600
{ ca  lys a 207 }3.294 -3.686 22.018
{ ca  ser a 208 }6.553 -3.076 20.186
{ ca  phe a 209 }9.290 -4.475 17.947
{ ca  asn a 210 }13.018 -4.734 17.555
{ ca  arg a 211 }14.261 -2.964 14.424
{ ca  asn a 212 }15.118 -5.878 12.144
{ ca  glu a 213 }14.743 -6.529 8.401
{ ca  cys a 214 }11.029 -6.320 9.025
@vectorlist {cdr} color= yellowtint master= {CDRs}  master= {molec}
{ ca  val a 29 }P -33.350 38.515 28.670
{ ca  val a 30 }-37.033 37.790 29.279
{ ca  thr a 31 }-37.322 34.291 27.758
{ ca  tyr a 32 }-35.513 35.070 24.454
{ ca  val a 33 }-33.112 32.174 24.303
{ ca  tyr a 49 }P -37.268 28.632 21.166
{ ca  gly a 50 }-38.476 31.260 23.588
{ ca  ala a 51 }-38.927 29.794 27.039
{ ca  ser a 52 }-39.567 26.212 25.964
{ ca  asn a 53 }-42.028 25.498 23.120
{ ca  gly a 91 }P -31.817 36.675 21.129
{ ca  tyr a 92 }-32.972 39.690 23.144
{ ca  ser a 93 }-30.743 42.413 21.662
{ ca  tyr a 94 }-27.811 42.759 19.273
{ ca  pro a 95 }-25.176 41.772 19.430
@vectorlist {SS} color= yellow master= {SS} master= {molec}
{ ca  cys a 23 }P -27.564 28.698 30.695
{ cb  cys a 23 }-28.136 28.795 29.273
{ sg  cys a 23 }-27.695 30.261 28.306
{ ca  cys a 88 }P -28.107 28.603 24.258
{ cb  cys a 88 }-28.429 29.074 25.670
{ sg  cys a 88 }-26.927 29.565 26.567
{ ca  cys a 134 }P 0.837 3.635 17.336
{ cb  cys a 134 }1.632 3.792 18.624
{ sg  cys a 134 }1.393 2.415 19.786
{ ca  cys a 194 }P 4.766 1.879 22.679
{ cb  cys a 194 }4.000 1.901 21.345
{ sg  cys a 194 }2.503 2.929 21.411
{ ca  cys a 214 }P 11.029 -6.320 9.025
{ cb  cys a 214 }10.418 -7.493 8.253
{ sg  cys a 214 }8.845 -8.058 8.987
{ sg  cys a 23 }P -27.695 30.261 28.306
{ sg  cys a 88 }-26.927 29.565 26.567
{ sg  cys a 134 }P 1.393 2.415 19.786
{ sg  cys a 194 }2.503 2.929 21.411
@subgroup {heavy ch 1} dominant
@vectorlist {Calphas} color= magenta master= {Calphas2} master= {molec}
{ ca  val b 2 }P -36.392 23.976 2.675
{"}-36.392 23.976 2.675
{ ca  lys b 3 }-32.616 24.527 2.396
{ ca  leu b 4 }-29.680 26.961 2.157
{ ca  gln b 5 }-26.064 26.135 1.416
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{ ca  lys b 19 }-16.592 36.822 -0.594
{ ca  met b 20 }-18.809 33.868 0.405
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{ ca  glu b 97 }-35.285 32.777 15.730
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{ ca  thr b 453 }21.811 -29.991 -44.765
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@vectorlist {cdr} color= yellowtint master= {CDRs}  master= {molec}
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{ ca  thr b 31 }-39.587 37.954 3.124
{ ca  tyr b 32 }-36.819 36.806 5.403
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{ ca  pro b 101 }-33.862 28.159 12.479
@vectorlist {SS} color= yellow master= {SS} master= {molec}
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{ sg  cys b 456 }19.412 -26.933 -32.716
{ sg  cys b 22 }P -26.736 30.831 3.145
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{ ca  pro c 95 }1.329 -68.320 56.898
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{ ca  thr c 97 }-1.169 -62.489 56.259
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{ ca  pro c 120 }9.198 -30.470 22.913
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@vectorlist {CDRs} color= yellowtint master= {CDRs}  master= {molec}
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{ ca  val c 30 }-7.606 -64.324 69.437
{ ca  thr c 31 }-6.068 -60.837 69.610
{ ca  tyr c 32 }-2.930 -61.639 67.553
{ ca  val c 33 }-2.952 -58.714 65.156
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{ ca  gly c 50 }-1.821 -57.803 70.435
{ ca  ala c 51 }-5.232 -56.321 71.141
{ ca  ser c 52 }-4.148 -52.745 71.709
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{ ca  gly c 91 }P 0.094 -63.258 63.602
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@vectorlist {SS} color= yellow master= {SS} master= {molec}
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{ cb  cys c 23 }-8.310 -55.378 60.467
{ sg  cys c 23 }-7.409 -56.836 59.882
{ ca  cys c 88 }P -3.313 -55.185 60.152
{ cb  cys c 88 }-4.697 -55.664 60.548
{ sg  cys c 88 }-5.694 -56.106 59.089
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{ cb  cys c 134 }0.659 -30.687 30.035
{ sg  cys c 134 }-0.586 -29.436 30.411
{ ca  cys c 194 }P -3.598 -28.803 27.123
{ cb  cys c 194 }-2.240 -28.815 27.848
{ sg  cys c 194 }-2.245 -29.898 29.326
{ ca  cys c 214 }P 10.583 -18.818 17.946
{ cb  cys c 214 }11.302 -18.699 19.309
{ sg  cys c 214 }11.096 -17.135 20.257
{ sg  cys c 23 }P -7.409 -56.836 59.882
{ sg  cys c 88 }-5.694 -56.106 59.089
{ sg  cys c 134 }P -0.586 -29.436 30.411
{ sg  cys c 194 }-2.245 -29.898 29.326
@subgroup {heavy ch 2} dominant
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{ ca  leu d 4 }18.764 -53.535 60.294
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{ ca  leu d 11 }17.346 -56.486 38.260
{ ca  ala d 12 }17.345 -60.175 37.313
{ ca  arg d 13 }16.441 -62.155 34.195
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{ ca  met d 20 }19.895 -60.449 49.374
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{ ca  ala d 24 }21.539 -55.979 61.345
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{ ca  gly d 26 }22.085 -52.600 67.572
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{ ca  thr d 28 }21.949 -59.454 70.134
{ ca  phe d 29 }20.994 -61.099 66.828
{ ca  thr d 30 }21.292 -64.792 67.837
{ ca  thr d 31 }18.381 -64.474 70.290
{ ca  tyr d 32 }15.971 -63.314 67.632
{ ca  thr d 33 }13.519 -64.629 65.116
{ ca  ile d 34 }13.729 -62.868 61.777
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{ ca  gly d 42 }0.753 -50.596 44.891
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{ ca  gly d 44 }-0.366 -55.281 50.065
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{ ca  trp d 47 }4.947 -62.522 54.243
{ ca  ile d 48 }7.497 -64.982 52.906
{ ca  gly d 49 }10.420 -66.914 54.487
{ ca  tyr d 50 }11.228 -66.983 58.219
{ ca  ile d 51 }14.119 -68.522 60.111
{ ca  asn d 52 }14.487 -68.611 63.922
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