3D Analysis :: Select Kinemage Files & Documentation
On this page are select kinemage files and documentation files available for download. Clicking on the filename/links should download the desired file; some browsers may require a right-button or option-click. All files are "zip"-compressed text files, unless otherwise marked, and have unix linefeeds.
Kinemages Having Nothing to do with Molecular Structure
DomeKit.kin (96KB)
Geodesic Dome Construction Kit- WorldMap.kin (84KB)
Earth Globe Map - vulture.kin (16KB)
Actual 3-D Flight Path of a Vulture - widget.kin (4KB)
Strange Geometric Figure - consternation.kin (60KB)
Movement Along a Geologic Fault
Kinemage Supplement to "An Introduction to Protein Structure", 2nd Edition, by Branden and Tooze
- BTkinToC.txt.zip(4KB)
Table of Contents - Listing of All Kinemages in this Supplement - c1Basics.kin.zip(44KB)
Chapter 1 - The Building Blocks - c2Motifs.kin.zip(80KB)
Chapter 2 - Motifs of Protein Structure - c3Alpha.kin.zip(92KB)
Chapter 3 - Alpha-Domain Structures - c4Al_Bet.kin.zip(100KB)
Chapter 4 - Alpha/Beta Structures - c5Beta.kin.zip(124KB)
Chapter 5 - Antiparallel Beta Structures - c6FldFlx.kin.zip(284KB)
Chapter 6 - Folding and Flexibility - c7DNA.kin.zip(48KB)
Chapter 7 - DNA Structures - c8HthTF.kin.zip(108KB)
Chapter 8 - DNA Recognition in Procaryotes by Helix-Turn-Helix Motifs - c9EuTF.kin.zip(76KB)
Chapter 9 - DNA Recognition by Eucaryotic Transcription Factors - c10TFfam.kin.zip(84KB)
Chapter 10 - Specific Transcription Factors Belong to a Few Families - c11SerPr.kin.zip(96KB)
Chapter 11 - An Example of Enzyme Catalysis: Serine Proteases - c12Membr.kin.zip(200KB)
Chapter 12 - Membrane Proteins - c13SigTr.kin.zip(100KB)
Chapter 13 - Signal Transduction - c14Fiber.kin.zip(56KB)
Chapter 14 - Fibrous Proteins - c15Immun.kin.zip(116KB)
Chapter 15 - Recognition of Foreign Molecules by the Immune System - c16Virus.kin.zip(180KB)
Chapter 16 - The Structure of Spherical Viruses - c17Engin.kin.zip(88KB)
Chapter 17 - Prediction, Engineering, and Design of Protein Structures - c18StDet.kin.zip(64KB)
Chapter 18 - Determination of Protein Structures
Tutorials, Demos & Helps
- Demo5_4a.kin (100KB)
The initial demonstrations for new users of kinemages. - Demo5_4b.kin (400KB)
A continuation of demo5_4a.kin. - Make_kin.txt (24KB)
An introductory tutorial for making kinemages using ricin as the example protein. - mageHelp.txt (12KB)
Printout of the Help Listing from Mage 6.30
The Protein Tourist Series
- ProTour1.kin.zip
Doubly-Wound Parallel Alpha/Beta Proteins, or Nucleotide-Binding Domains - ProTour2.kin.zip
Coiled-Coil Structure of the Leucine Zipper Peptide from Transcription Factor GCN4 - ProTour3.kin.zip
Protein-DNA Interactions in the Lambda Repressor/Operator Complex - ProTour4.kin.zip
A Survey of Proteins in the 'Small Irregular' Category of Tertiary Structure - ProTour5.kin.zip
Structure and Function of Zinc Proteases - ProTour6.kin.zip
Serine Proteases - ProTour7.kin.zip
Examples of Proteins from the Commonest Tertiary-Structure Types - ProTour8.kin.zip
The T-R, Deoxy-Oxy Transition in Human Hemoglobin - ProTour9.kin.zip
A Tour of the All-Beta Parallel Coil Structure of Pectate Lyase C - NATour1.kin.zip
A Sampling of DNA Dodecamer Structures